Gene BBta_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1924 
Symbol 
ID5151362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1986050 
End bp1986904 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content64% 
IMG OID640556868 
Productpeptide ABC transporter permease 
Protein accessionYP_001238024 
Protein GI148253439 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCG TCGCGAAATC CGCTCCGCGC CATCAGCGAT TTGGCTACCG CATCAATGCT 
GTCGGCGTGG CGGGGGCGCT GGTCGTGGGA TTCTGGATCG TGGTGGCGCT CGCCGCGCCC
GCGATCGTTC CGCATCCGAT CGGCGACATC GTCGACACCG ACTATTTCGG CCCGATCAGC
CGCGAACTCT GGCTCGGCTC CGACTATCTC GGCCGTGACA TGACCTCGCG CATCCTGATG
GGCGCCAGAT ATACGCTCGG CATTTCGATT GCCTCCGTCA TCATCGCCGG CGTGTCGGGG
GTCATGCTCG GCATGATTGC GGCGATCACC GGCGGCGTCG TCGATATGGT GCTGAGCCGG
TTTCTCGATG CGCTGAACTC GATCCCGAGC AAGCTGTTCA GCCTCGTCGT TGTCGCTGCG
GTGGGATCGT CGATTCCCGT TCTCATCGTG ACGATGGCGG TGATCTACAT CCCCGGGGCC
TTCCGCTTCG CCCGCGCGCT CGCCGTCAAT ATCAACACCA TGGATTTCGT CGTGGTGGCC
CGCATCCGCG GCGAGAGCCT GTTCTATCTG ATCCGTGCGG AGATCCTGCC CAACATCATC
GGTCCCGTGC TGGTCGATCT CGGCTTGCGC TTCGTCTTCA TCGTGCTGCT GCTGTCGGGG
CTGTCCTTCC TCGGCCTCGG CGTCAAGCCG CCCTACGCCG ATTGGGGCGC GCTGGTGCGC
GAGAACATCG GCGGTTTGCC CTATGCCGCG CCGGCCGTGA TTGTCCCGTC GCTGGCGATT
GCCAGCCTGA CCATCGCGGT CAACCTCCTG ATCGACAATC TGCCGACCAA GATCCGCGAC
CGGGAGAACT CCTAG
 
Protein sequence
MTSVAKSAPR HQRFGYRINA VGVAGALVVG FWIVVALAAP AIVPHPIGDI VDTDYFGPIS 
RELWLGSDYL GRDMTSRILM GARYTLGISI ASVIIAGVSG VMLGMIAAIT GGVVDMVLSR
FLDALNSIPS KLFSLVVVAA VGSSIPVLIV TMAVIYIPGA FRFARALAVN INTMDFVVVA
RIRGESLFYL IRAEILPNII GPVLVDLGLR FVFIVLLLSG LSFLGLGVKP PYADWGALVR
ENIGGLPYAA PAVIVPSLAI ASLTIAVNLL IDNLPTKIRD RENS