Gene BBta_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1923 
Symbol 
ID5151361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1985103 
End bp1986053 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content64% 
IMG OID640556867 
ProductABC transporter permease 
Protein accessionYP_001238023 
Protein GI148253438 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.887437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACATC GGATCGTCTC CCTCGTCCTT GCCCGGCTGG CCATCGCGCT GGTCACCGCG 
ATCATTGTTT CATTCGCCGT GTTCTTCGCC ACCGCGATGC TGCCGGGCGA CACCGCGACC
ATCCTGCTCG GCCAGGCCGC GACCCCGGAG GCCGTCGAAG GCCTGCGCAA GGCGATGCAC
CTCGACGATC CCGCGATCTT CCGCTTCCTG CGCTGGCTCG CCGGCGTGGT GCATGGTGAC
CTCGGCGTCT CCTATGCCAA CAACATGCCG GTCGCCAAGC TGATATCAGG ACGGCTCGTC
AACACCCTCA AGCTCGCCGG CCTCACAGCG GTCATCTCGG TGCCGCTGGC GCTGACGCTC
GGCATCACCG CGGCGATGCT GCGCAACACG CTGTATGACC GCTGCCTCAC CATCGCGATC
ATCGGCGTGG TTTCTGTTCC GGAGTTCATG ATCGCGACGC TCGCCGTGCT GCTGTTTGCG
GTCTATCTCA ACTGGCTGCC GGCGGTGTCC TTCACCAGCG AGATCCGCAC CGTCTATGAT
TTCGCGCGCG CTTACGCGAT GCCGGTCGTC ACGCTCACCG TCGTGATCTC GGCGCAGATG
ATCCGGATGA GCCGGGCGGC CGTGGTCGAG ACGCTGAACA CGCCCTATGT CGAGATGGCG
CTGCTGAAGG GCGCCTCGCG CGGCCGGCTC GTCTTTCACC ACGCGCTCCC CAATGCGCTC
GGTCCGATCG TGAATGCGGT GGCGCTGTCA TTGTCCTATC TCCTTGGTGG CGTCATCATC
GTCGAGACCG TCTTCAACTA TCCTGGCATC GCCAAGCTGA TGGTCGACGC GGTGTCGACC
CGCGATCTGC CGCTGATCCA GAGCTGCGCC ATCATCTTCT GCTTCGGCTA TCTGTTCCTG
ACGACCACGG CCGACATCAT CGCCATCCTC TCCAATCCGA GGCTGCGATG A
 
Protein sequence
MKHRIVSLVL ARLAIALVTA IIVSFAVFFA TAMLPGDTAT ILLGQAATPE AVEGLRKAMH 
LDDPAIFRFL RWLAGVVHGD LGVSYANNMP VAKLISGRLV NTLKLAGLTA VISVPLALTL
GITAAMLRNT LYDRCLTIAI IGVVSVPEFM IATLAVLLFA VYLNWLPAVS FTSEIRTVYD
FARAYAMPVV TLTVVISAQM IRMSRAAVVE TLNTPYVEMA LLKGASRGRL VFHHALPNAL
GPIVNAVALS LSYLLGGVII VETVFNYPGI AKLMVDAVST RDLPLIQSCA IIFCFGYLFL
TTTADIIAIL SNPRLR