Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1913 |
Symbol | |
ID | 5150769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 1974799 |
End bp | 1975671 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640556857 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001238013 |
Protein GI | 148253428 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.980095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCGGT CGCTGATCTC CGTCGTCGAG ACCGGCAGCA TCACTGAAAC CGCGCGGCGG CTGGGACGCA CCCAGCCGGC GATCACCTTG CAGCTCCAGC GTCTCGAGGA GCTCACGGGC AAGCAGCTGT TCGTCCATGG CGGGCGACGG CTGGCGCTGA CCGAGGACGG CGGCATCGTG CTGACTTACG CCCGTTCCAT CCTGCGGCTG CATGACGAGC TGATCTCGCA GCTGGCATCG CAGGAGATCG AGGGCCAAGT CGTGCTCGGC ACGCCCGACC TCTACGCGGC CTTCATCCTC CCGTCGATCC TCAGCGTCTT CCGCAAATCC TTTCCGCGCA TCCAGGTCGA GCTGAACTGC GCGCTGTCGA CGCCGCTGGT GGAGCTGGTG AAGCGCAGCG AGGTCGATAT CGCACTGGTC ACGCGCATGA ATGATTTCAC CGGCGGCCAG GTCGTAAGGC GGGAGCAGCT GGTGTGGATG ACCGGGGAAC AGTCGGCGGC CCATCAAGAG CGGCCGATCC CGCTGGCGCT GCTTCCCCAG GGCAACATCT ATCGCGACCA CGCGATCGCG GCGCTGGAGG CCGCAAATTT GCGTTGGCGC ATCGCCTGTC AGAGCGAGAG CGTCGGCGGC CTGCAGGCCG CGGCGTTCGC CGGAATGGCG GTGACCGTGC TCGGCCGCAG CGCGCTGGTC GCGGGCATGC GCGAGCTCGG CCCCGCCGAC GGACTTCCCG CGCTGCCGCA GGTCGAGCTG CTGCTGTACA AGTCGAGCGG CGCCACCTCG AAGGCGGCCA CCGCGCTGCA CGATTACCTC GCGCATTATC TGCGCCTCGG CGATCAGCTC GGCGAGACCG GGGTCCCTAT CGATATGGGC TGA
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Protein sequence | MLRSLISVVE TGSITETARR LGRTQPAITL QLQRLEELTG KQLFVHGGRR LALTEDGGIV LTYARSILRL HDELISQLAS QEIEGQVVLG TPDLYAAFIL PSILSVFRKS FPRIQVELNC ALSTPLVELV KRSEVDIALV TRMNDFTGGQ VVRREQLVWM TGEQSAAHQE RPIPLALLPQ GNIYRDHAIA ALEAANLRWR IACQSESVGG LQAAAFAGMA VTVLGRSALV AGMRELGPAD GLPALPQVEL LLYKSSGATS KAATALHDYL AHYLRLGDQL GETGVPIDMG
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