Gene BBta_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1908 
Symbol 
ID5150619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1968281 
End bp1969387 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content68% 
IMG OID640556852 
ProductABC transporter ATP-binding protein 
Protein accessionYP_001238008 
Protein GI148253423 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCG AACGAGGCGA TATTGAGCTC GCAGGTGTCT GCAAGAGCTA TGACGGTGTC 
GTCAATGCCG TCGACGGCGT CAATCTCAGG ATTGCCGACG GCGCTTATTG CTGCTTCATC
GGCCCGTCCG GCTGCGGCAA GACCACCATC CTGCGCATGA TTGCCGGCCA TGAGGACCCG
ACCGCGGGAG AGATCGTGAT CGGCGGCCAC AACGTGGTCG GCCTGCCGCC GGTGCAGCGG
CGCACCGCGA TGATGTTCCA GTCCTACGCG CTGTTTCCGC ACCTGACGGT GCGCGAGAAC
ATCGCCTTTG CGCTGCAGGT CCGCGGCCAG TCCAAGGCCG AACGGCTGCG GGCGGCTGAC
GCGATGATCG AGAAGGTACG CCTGACGCAG TTTGCCGACC GGCTGCCGGC GCAGCTCTCC
GGCGGGCAGC AGCAGCGCGT GGCGCTGGCG CGGGCCGCGA TCACCGAGCC GCGCGTGCTG
CTGCTCGACG AGCCGCTGTC GGCGCTCGAC GAGCAGCTGC GGGTGCAGAT GCGCCAGGAG
TTGCGGCGGA TGCAGCGCGA GCTCGGCATT ACCTTCATCC ACGTCACCCA CACCCAGCTC
GAGGCGATCG CGCTTGCCGA TCTCGTCGTG GTGATGGAGC AGGGGCGGAT CAAGCAGGCC
GGGCCGGCGC GCGAGGTCTA CGCCCATCCG CGCGACCGGT ACGTCGCCGA GTTCATGGGC
GGCCAGAACG TGCTGTCCGG CCGGGTCGCG AAGGTCAATG GCGGGAGCTT CCTGCTGAAG
CAGGGCGCGC GAGAGGCCAT CGAGGTGCCG CTGCAGGCGC GTCGCGGCAT CGGCGTCGGC
GACACTATCG ATATCGCCGT GCGCCGTGAC GATGTTGCGC TGGTCCGGCC CGGCGCGTCG
CTGCCGCCCG GTTGCGGCAC CGCGCTGCCG AGTCGCGTGA CCGCGATCGA GTATCAGGGC
TATTTCGTCA AGGTCATGCT CGACACCGTG CCGGACGACG AGTTCGTCGC CTATGTGCCC
GAAAAGACCT TCTTCGCAGA TCCCTTCAAC GTCGGCGACG TCGTTCTGGC CACCTGGGTG
GCGGATCGCG CCCGCCCGCT CGCCTGA
 
Protein sequence
MRIERGDIEL AGVCKSYDGV VNAVDGVNLR IADGAYCCFI GPSGCGKTTI LRMIAGHEDP 
TAGEIVIGGH NVVGLPPVQR RTAMMFQSYA LFPHLTVREN IAFALQVRGQ SKAERLRAAD
AMIEKVRLTQ FADRLPAQLS GGQQQRVALA RAAITEPRVL LLDEPLSALD EQLRVQMRQE
LRRMQRELGI TFIHVTHTQL EAIALADLVV VMEQGRIKQA GPAREVYAHP RDRYVAEFMG
GQNVLSGRVA KVNGGSFLLK QGAREAIEVP LQARRGIGVG DTIDIAVRRD DVALVRPGAS
LPPGCGTALP SRVTAIEYQG YFVKVMLDTV PDDEFVAYVP EKTFFADPFN VGDVVLATWV
ADRARPLA