| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1888 |
|---|
| Symbol | |
|---|
| ID | 5148899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 1953720 |
|---|
| End bp | 1954685 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640556837 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001237993 |
|---|
| Protein GI | 148253408 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.717917 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCCG GACACATGAT CTCCCGCCGT GGATTCTGCC TCTGCTGCAT GGGTACGGCA
ACATTCGCCG CCACCGGCGG GTGGATGAGC CCACGCGAGG CCTATGCGGA AGCACGCGGC
CTGGTAAGTC TCATCAAGGA TAGTGCCGCC CAGGCAAAAA TCGTTACTCA CAGGCTGAGA
GACAACGTTT CCATTCTCGA GGGGTCCGGA GGCAACGTCG CGGTTCTGAG CGGAAGAGAC
GGCCTCGTCA TGGTTGATGC AGGCATTAGT GTGTCGCGCC ACCAGATGAC CAAGGCTCTC
TCCGCGATCT CCCCTCAGCC GGTGACGCAT CTCATCAACA CCCACTGGCA TTTTGACCAC
TCTGATGGCA ATCCTTGGAT CGGCGCTGGA GGAGCTGAGA TCATCGCCCA TGAGAACACA
CGCAAGTACC TGTCGCAGGT GAAGCGTGTG GAGGATTGGG ACTACAATTT CCTACCGCTC
GTACAGACCG GGCTGCCCGG TCGGGTGTTC TCAAAGGAGC ATTCGGTCAA GCTCAACGGT
CAGTCGCTAA CCCTGAAGCA CTATCGCTCG GCACATACCG ATGGCGACAT TTCAGTAATG
TTTGCTGAAG CGGACGTCCT GCATACCGGC GATACCTACT GGAACGGAAT CTATCCGTTC
ATCGACTATT CGACAGGAGG CGGCATTGAC GGCATGATCG CCGCTTCCGA TGCGAACCTT
GCCGCATCGA CCGACAAGAC AATCATCATC CCAGGTCACG GAAACCCAGT GAGCAATCGC
GCCGAGCTGC AGGAATTCCG AGACATGCTT GTCGCCATCC GCGAGAATGT CGCAACGCTC
AAGCGCCAAG GACGTTCGAA GAATGAGACC GTCGCCGCTA AGCCAACGGC CGCGTTCGAC
CTCAAGTGGG GCAATTTCGT TATTGATCCA GGCTTCTTCA CCCGGCTGGT CTACGAGGGC
GTCTAG
|
|---|
| Protein sequence | MKSGHMISRR GFCLCCMGTA TFAATGGWMS PREAYAEARG LVSLIKDSAA QAKIVTHRLR
DNVSILEGSG GNVAVLSGRD GLVMVDAGIS VSRHQMTKAL SAISPQPVTH LINTHWHFDH
SDGNPWIGAG GAEIIAHENT RKYLSQVKRV EDWDYNFLPL VQTGLPGRVF SKEHSVKLNG
QSLTLKHYRS AHTDGDISVM FAEADVLHTG DTYWNGIYPF IDYSTGGGID GMIAASDANL
AASTDKTIII PGHGNPVSNR AELQEFRDML VAIRENVATL KRQGRSKNET VAAKPTAAFD
LKWGNFVIDP GFFTRLVYEG V
|
|---|
| |