| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1881 |
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| Symbol | mnmA |
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| ID | 5149837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1949469 |
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| End bp | 1950662 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640556831 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001237988 |
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| Protein GI | 148253403 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAACA GTCTCGATCT CGAAGGCCGT CCCGAAGACA CCAGGGTCGT CGTCGCCATG
TCCGGCGGCG TGGACTCGTC GGTCACGGCT GCGCTGTTGA AGTCGGAAGG CTACGACGTC
GTCGGCATCA CCTTGCAGCT CTATGATCAT GGCGCGGCGA CCCACCGCAA GGGCGCCTGC
TGCGCCGGCC AGGACATTCA CGACGCGCGC AACGTCGCCG AGCGGCTCGG CATCCCGCAT
TATGTGCTGG ACTATGAGGA CCGCTTCCGG GAGTCGGTGA TCGACAATTT TGCCGCCAGC
TATGCCTCTG GCGAGACCCC TGTGCCGTGC ATCGAGTGCA ATCGCGCGAT CAAGTTCGGC
GACCTGCTGA AGACCGCGCG CGAGCTCGGT GCCTCGGTGC TCGCCACCGG CCATTATGTC
GCCTCGCGCC GGCTGGCGGA TGGATCGCGC GCTCTCGTGT GCGCGGCCGA TGCCGATCGC
GACCAGAGCT ATTTCCTGTT TGCGACCACA CGTGAGCAGC TCGACTATCT GCGCTTTCCG
CTCGGTGACA TGACCAAGCC GGAGGTGCGC GAACTGGCGC GCCGCTTCGG CCTGGAGGTC
GCCGACAAGC ACGACAGCCA GGACATCTGC TTCGTGCCGA CCGGCCGCTA CACCGACATC
ATCGGCAAGC TGCGGCCGAA CGCGATGGAG CCCGGCGAGA TCGTCGACCT CAATGGCCGG
GTGCTCGGGG CGCATCAGGG CATCGCCAAC TACACGATCG GCCAGCGCAA GGGGCTCGGC
ATCGCCGCCG GCGCACCGCT TTATGTCGTG AAGCTGGACG TCGCGACCCG CCGGGTCGTC
GTCGGCCCGC GTGAGGCGCT GCGCACGCAC CGCATCACGC TGCGCGAGGT CAACTGGATC
GGCGACGGCG TGCTGGATGC CGCCGTGCGC GACGGCCTCG AGCTGTTCGT GCGGGTGCGC
TCCACGCGGC CGCCGCAGCC GGCCTGGCTC CGCGGCGCCG ATGGACAATA CGAGGTCGAG
CTCGTCGCCG GCGAGGAGGG CGTCTCGCCG GGGCAGGCCT GCGTGTTCTA TGACGCCGCC
TCTGGTCGTG CGCGTGTTCT TGGCGGCGGC TTCATTCAGA GCGCCGTTGC CGAGAGCCGC
ACCACCGCCG GTCTCGTCAG GCCGCAGCGC GTGGCCGAGC CGGTCCGCGG CTGA
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| Protein sequence | MLNSLDLEGR PEDTRVVVAM SGGVDSSVTA ALLKSEGYDV VGITLQLYDH GAATHRKGAC
CAGQDIHDAR NVAERLGIPH YVLDYEDRFR ESVIDNFAAS YASGETPVPC IECNRAIKFG
DLLKTARELG ASVLATGHYV ASRRLADGSR ALVCAADADR DQSYFLFATT REQLDYLRFP
LGDMTKPEVR ELARRFGLEV ADKHDSQDIC FVPTGRYTDI IGKLRPNAME PGEIVDLNGR
VLGAHQGIAN YTIGQRKGLG IAAGAPLYVV KLDVATRRVV VGPREALRTH RITLREVNWI
GDGVLDAAVR DGLELFVRVR STRPPQPAWL RGADGQYEVE LVAGEEGVSP GQACVFYDAA
SGRARVLGGG FIQSAVAESR TTAGLVRPQR VAEPVRG
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