| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1878 |
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| Symbol | |
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| ID | 5148978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 1946807 |
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| End bp | 1947499 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640556829 |
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| Product | putative flagellar basal-body rod modification protein FlgD |
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| Protein accession | YP_001237986 |
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| Protein GI | 148253401 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1843] Flagellar hook capping protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.642476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCG GTGACGCAAT CACGTCAAGC CCGCCAGTTT CGGGGACGAC CACCTCGTCC
ACATCGAACG GCAGCAGCCT GAGCTCGAAG GCTGGCTCGA CCATCGCGGG CAACTTCCAG
ACCTTCCTGA CGCTGCTGAC GACGCAGCTG CAGAACCAGA ACCCGCTTGA TCCGCTGGAC
ACCAACCAGT TCACGCAGCA GCTCGTTCAG TTCGCGGGCG TGGAGCAGCA GCTCAAGACC
AACGACCAGC TGGGCTCTTT GATCTCCATG CAGCAGACGA CCCAGGCCAC CCAGGCGCTG
GCCTTCGTCG GCAAGACGGC GGTCGTCAAC GGCTCGACGA CCAACCTGGC GAGTGGCAAG
GCCAGCTGGG ACCTCAGCAT CCCCAAGGAC TGCACCATGA CCGCGACGAT CACCAACAGC
GTCGGTCAGA CCGTCTTCAG TGGCACCTAC AACGCAAAGG CGGGCGATAA CCAGGCCTAC
AACTGGAACG GCCAGGGCAG CGACGGCACC CAATGGCCGG ATGGAAAATA CAAGCTCACC
GTGACCGCCA AGGACAGCTC CGGCAATCCG GTGGCGGTGT CGACCCAAAT CGAGGGGACC
GTCTCCTCGG TCGACCTGAC GCAACAACCG CCCTTGCTCT CGATCGGCGG CCAGACCTAC
ACCGTGAGCC AGATCCAGCG GATCGTTAAC TGA
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| Protein sequence | MAIGDAITSS PPVSGTTTSS TSNGSSLSSK AGSTIAGNFQ TFLTLLTTQL QNQNPLDPLD
TNQFTQQLVQ FAGVEQQLKT NDQLGSLISM QQTTQATQAL AFVGKTAVVN GSTTNLASGK
ASWDLSIPKD CTMTATITNS VGQTVFSGTY NAKAGDNQAY NWNGQGSDGT QWPDGKYKLT
VTAKDSSGNP VAVSTQIEGT VSSVDLTQQP PLLSIGGQTY TVSQIQRIVN
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