| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1860 |
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| Symbol | napC |
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| ID | 5154590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 1931050 |
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| End bp | 1931712 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640556812 |
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| Product | periplasmic nitrate reductase subunit NapC |
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| Protein accession | YP_001237969 |
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| Protein GI | 148253384 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.791611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAGCG CCGACATCCC GCAGGGGACG GGAGCGCCGA CCCCCGAAAA ACGGCTCGGC
CTCGTCCGTC GCGCCTGGCA GTTCGTGCTC GACCTGATCG ACGTGCTGCT CAAGCCGAGT
TCGATCTTCG GTCTCGGCGT GCTGGTACTC GCCGGCTTCG TCGCCGGCGT GATCTTCTGG
GGCGGCTTCA ACACCGCGCT GGAGATCACC AACACCGAGA AGTTCTGCAC CGGCTGCCAC
GAGATGAAGG ACAACGTGTT CGCCGAGTTG AAGACGACCG TGCACTTCTC GAACCGCTCC
GGCGTGCGCG CATCGTGCCC GGACTGCCAC GTGCCGCACA ACTGGACCGA CAAGATCGCG
CGCAAGATGC AGGCGTCCAA GGAGGTCTGG GGCCATCTGT TCGGCTCGAT CGACACCCGC
GAGAAGTTCA CCGACCGAAG GCTCGAGCTG GCGCTGCACG AATGGGCGCG CTTCAAGGCC
AATGATTCCC TGGAGTGCCG CAACTGCCAC AGCGCGCAGT CGATGGACAT CACCAAACAG
TCGCCGCGCG CCGTCGAAGC CCACCAGCGC TTCCTCTTCA CCGGTGAAAA GACCTGCATC
GACTGCCACA AGGGCATCGC GCATCATCTG CCGGACATGA GGGGCGTGCC GGGCTGGCAG
TAG
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| Protein sequence | MSSADIPQGT GAPTPEKRLG LVRRAWQFVL DLIDVLLKPS SIFGLGVLVL AGFVAGVIFW
GGFNTALEIT NTEKFCTGCH EMKDNVFAEL KTTVHFSNRS GVRASCPDCH VPHNWTDKIA
RKMQASKEVW GHLFGSIDTR EKFTDRRLEL ALHEWARFKA NDSLECRNCH SAQSMDITKQ
SPRAVEAHQR FLFTGEKTCI DCHKGIAHHL PDMRGVPGWQ
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