Gene BBta_1859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1859 
Symbol 
ID5154589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1929703 
End bp1930812 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content65% 
IMG OID640556811 
Producthypothetical protein 
Protein accessionYP_001237968 
Protein GI148253383 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCT TCTCCCCCCA CCAGGATTCC GCCCTCAAAG CCGTTTCGGA CTGGCTGAAG 
GCGAAGCCCG GCCAGAATGG CACGCCGCAG GTGTTTCGGC TGTTCGGCTA TGCCGGAACC
GGCAAGACCA CGCTCGCCCG CCACATCGCC GAGGGCGTCG ATGGCGAGGT CAAGTTCGCG
GCCTTCACCG GTAAGGCGGC GCTGGTGATG CGCAACAAGG GTTGCGACGA CGCCTCCACC
ATCCACTCAC TGATCTATCG CGCCCGCGAG AGCGGCGAGG AGCAGCCGAA CTTCGAATTG
TGGGACGACG CGCCGGCGTC CAAGGCCAAG CTGATCATCA TCGACGAATG CTCGATGGTC
GACGCCGATC TCGGCCGCGA CCTGTTGTCG TTCGACTGTC CGCTCCTGGT GCTCGGCGAT
CCCGCGCAGC TGCCGCCGGT GCAGGGCGGC GGCTTCTTCA CCGAGAGCGA GCCGGACGTG
ATGCTGACCG AGGTGCATCG CCAGGCCAAG GACGATCCGA TCGTGCGGAT GTCGATGGAC
GTGCGCGAAG GCAACACGCT CGACATCGGT CGTTATGGCG AGAGCGAGGT GGTCGAGCGT
CGTGAACTCG ATCCGTCCCG CGTCATGGAG GCCGACCAGG TGCTGGTCGG CCGCAACGCC
ACGCGCCGCG CCTACAACAA CCGGTTCCGG CAGCGCCTCG ACATCGAGGA CGCGCTCCCC
GTGGCCGGCG ACAAGCTGGT CTGCCTGCGC AACAACCGCA AGAAGGGCCT GTTCAATGGC
GGCCTGTGGC GGGTGAAGTC GCGCGCCACC TCCAAGTCCA AGATCGTCAC GATGCGCGTC
GCGCCCGATG AAGATCTCGG ACGCAAGGTG ACCAAGGTCT CGGTGCGCGG CGAATGCTTC
GCTGGCGGTA TCGAGGACAT CCCATGGGAC CAGCGCAAGC CCTATGATGA GTTCGACTAC
GGTTACGTGC TGACCGTGCA CAAGTCGCAG GGCTCGCAAT GGGACGACGT CGTGCTGTTC
GACGAGAGCT TCGCCTTCCA GGAAGCCCGC GCGCGCTGGC TCTACACCGG CATCACCCGC
GCCGCGAAGC GCCTATCCAT CGTTGTTTAA
 
Protein sequence
MTTFSPHQDS ALKAVSDWLK AKPGQNGTPQ VFRLFGYAGT GKTTLARHIA EGVDGEVKFA 
AFTGKAALVM RNKGCDDAST IHSLIYRARE SGEEQPNFEL WDDAPASKAK LIIIDECSMV
DADLGRDLLS FDCPLLVLGD PAQLPPVQGG GFFTESEPDV MLTEVHRQAK DDPIVRMSMD
VREGNTLDIG RYGESEVVER RELDPSRVME ADQVLVGRNA TRRAYNNRFR QRLDIEDALP
VAGDKLVCLR NNRKKGLFNG GLWRVKSRAT SKSKIVTMRV APDEDLGRKV TKVSVRGECF
AGGIEDIPWD QRKPYDEFDY GYVLTVHKSQ GSQWDDVVLF DESFAFQEAR ARWLYTGITR
AAKRLSIVV