Gene BBta_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1858 
Symbol 
ID5155674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1928428 
End bp1929555 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content64% 
IMG OID640556810 
Producthypothetical protein 
Protein accessionYP_001237967 
Protein GI148253382 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGGA AGACCACGAA AGACACGGCC TCGAATGGGT CACGCACCAA GCGCGCGAGC 
GCGAAGGCCA ACGTCGCGCG ACGGCAATCC GCAGCTCCGC TCGATCCGAT CGCCCAGTCG
CTGATCGATG AATCGATGCA GGCGGCGCAG ATCACCGAGC TGTCGGCCTT CGAGAGCGTG
CTGAATGGAC CGCCGAGGCT CGACGCGAAC AGCGCTCCGG TGAGGGCCAT GCTCGACGGC
GCCGCGCCCG ATGATGCCAA GCTGATGAAG GCGCTGATCG ACGGCCGGGA GACGAAACGC
GACAAGCGCC ACACCTCCGA CGAACTCGCC GACAATTGGC GACAGGGCGG CTATCCTTAC
AAATACCGCA TGTATCGCAA GGACTATGAG GAGCAGAAAT TCATCCTGCA GACCGAGCTG
CTCAAGCTGC AGAACTGGAT GAAGGATGCG CGGCAGCGCC TGGTACTCTT GTTCGAGGGC
CGCGACGCCG CCGGCAAGGG CGGTACCATC AAGCGCTTCA TGGAACACCT CAACCCGCGC
GGCGCCCGCG TCGTGGCGCT GGACAAGCCG AGCGACGTCG AGCGCGGCCA ATGGTACTTT
CAACGCTATG TCGAACACCT GCCGACAGCG GGCGAGATCG TGCTGTTCGA TCGCTCCTGG
TACAACCGCG CCGGCGTCGA GCGCGTGATG GGCTTCTGCT CTCAGGCCGA ATATGACGAA
TTTCTCCGCC AGGTGCCGGA GTTCGAGCGC AACCTCGTGC GCAGCGGCAT GCACCTGATC
AAGTTCTGGT TCTCGGTCAG CCGCGAGGAG CAGCGCCGCC GCTTCAAGGA GCGCGAGGCG
CACCCCTTGA AGCAGTGGAA GCTGTCACCG ATCGACACCG CCTCGCTCGA CAAATGGGAC
GACTATACCC GCGCCAAGGA GGCGATGTTC TTCTCGACCG ACACGGCCGA CTGTCCGTGG
ACCGTGATCA AGTCGGACGA CAAGAAGCGC GCGCGGCTGA ACGCGATGCG CTGCGTGCTG
CACTCTCTGC CCTATGCCGG CAAGGACGTG TCGCGCATCG GCCATGTCGA TGACCTCATC
GTCGGCCGCG CCAGCGTCAT CCACGAGCGC GAGGAGCACG CGAACTGA
 
Protein sequence
MARKTTKDTA SNGSRTKRAS AKANVARRQS AAPLDPIAQS LIDESMQAAQ ITELSAFESV 
LNGPPRLDAN SAPVRAMLDG AAPDDAKLMK ALIDGRETKR DKRHTSDELA DNWRQGGYPY
KYRMYRKDYE EQKFILQTEL LKLQNWMKDA RQRLVLLFEG RDAAGKGGTI KRFMEHLNPR
GARVVALDKP SDVERGQWYF QRYVEHLPTA GEIVLFDRSW YNRAGVERVM GFCSQAEYDE
FLRQVPEFER NLVRSGMHLI KFWFSVSREE QRRRFKEREA HPLKQWKLSP IDTASLDKWD
DYTRAKEAMF FSTDTADCPW TVIKSDDKKR ARLNAMRCVL HSLPYAGKDV SRIGHVDDLI
VGRASVIHER EEHAN