Gene BBta_1839 details

Gene Information

• Locus tag: BBta_1839
• Symbol: ftsH
• ID: 5155553
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bradyrhizobium sp. BTAi1
• Kingdom: Bacteria
• Replicon accession: NC_009485
• Strand: +
• Start bp: 1906346
• End bp: 1908202
• Gene Length: 1857 bp
• Protein Length: 618 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640556791
• Product: cell division protein ftsH (ATP-dependent zinc-metallo protease)
• Protein accession: YP_001237948
• Protein GI: 148253363
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 30
• Fosmid unclonability p-value: 0.651552
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAATCCG ATCCCAACAC CCGCAAGCAA GCCATCGCGG TCAGCTACAT CTTTCTTGCC 
GGGGTCGGCA TGCTGCTGCT GCAATGGCTG CTGACGACCT ACAACACGGT CGAGACCATT 
CCCTACAGCC AGTTCGAGCA ACTGGTCGAG CAAGGCAAGA TTGCGGAAGT GTCCGTCAGC 
CAGGACACCA TCCAGGGCAA GTTCAAGGAC AAGCAGCAGG ACGGCAAGAC CTCGTTCATC 
ACCGCGCGCG TCGATCCTGC GTTGGCGGAA AAGATGGCGT CCAAGGGCGT CACGGTGACC 
GGCGTGCCCT CGGGCGGTGT GATCCAGACG CTGCTGTCCT GGATCGTGCC GGCGTTGATG 
TTCTATCTGA TCTGGGTGTT CCTCGGCCGC AAGGTGATGG ACCGGCAGGG CTTTGGCGGG 
CTGATGTCGA TCGGCAAGTC GCGCGCCAAG GTCTATGTCG AGACCGACAC CAAGGTCACC 
TTCGCCGACG TTGCCGGCGT CGACGAGGCG AAGTTCGAGC TGCAGGAGGT GGTGCAGTTC 
CTGAAGGACC CGAAGAGCTA TGGCCGTCTC GGCGCGCATG TGCCGAAAGG CATTCTGCTG 
GTCGGCCCGC CCGGCACCGG CAAGACCCTG CTGGCGCGCG CCGTCGCAGG CGAGGCCGGT 
GTGGCGTTCT TCTCGATCTC CGGCTCGGAA TTCGTCGAGA TGTTCGTCGG CGTCGGCGCC 
GCGCGAGTGC GCGATCTGTT CGAGCAGGCG CGCAAGGCCG CGCCCTGCAT CATCTTCATC 
GACGAGCTCG ACGCGCTCGG GCGCAGCCGG ACCGCCGGCG GCGGGCTCGG CGGCTATGAC 
GAGAAGGAGC AGACGCTCAA CCAGCTGCTC GCCGAGCTCG ACGGCTTCGA TCCGAGCGCC 
GGCGTGATCC TGCTCGCCGC CACCAACCGG CCGGAGATCC TCGATCCGGC CCTGCTGCGC 
GCCGGTCGCT TCGACCGCCA GGTGCTGGTC GACCGGCCCG ACAAAGGCGG ACGGCTGGCG 
ATCCTCAAGG TGCATGTCCG CAAGATCACG ATGGCCGAGA GCGTCGATCT CGACAAGGTC 
GCCGCGCTGA CCGCGGGCTT CACTGGCGCC GACCTTGCCA ATCTGATCAA CGAGGCCGCC 
ATCGCTGCGA CCCGCCGCAG AGGACATGAG GTCACCTTCG ACGATTTCAC CGCCGCGATC 
GAGCGGATCG TGGCCGGCCT GGAAAAGAAG AGCCGAGTGC TCAATCCCGC TGAACGGCGG 
CGTGTCGCCT ATCACGAGAT GGGCCATGCG CTGGTCGCCG CCAATCTGGC CGGCGTCGAT 
CCGGTGCAGA AGGTGTCGAT CATTCCGCGC GGTGTTGGCG CGCTCGGCTA TACCATGCAG 
CGCCCGACCG AGGACCGCTT CCTGCTGGCC GTCAGCGAGT TGAAGAACCG CATCGCAGTG 
CTGATGGGCG GACGCGCGTC CGAGCAATTG ATCTTCGACG GTGATGTGTC CACCGGCGCG 
GCCGACGATC TGCAGCGTGC GACCGAGATC GCGATCGAGA TGGTCACCAA ATACGGCATG 
GACGCGACGG TCGGCCAGCG CACCTACGCG CCGCGGCCGC AGGCCTCGTT CCTGCAGCCG 
CAGGATCAGC TCGTATCGGC GGCCGAACAG ACCGGACGGG AGATCGACCT TGCCGTGCGC 
GATCTCATCG CGGAGGGCGG CGCGCGCGCC CGTGCGATCC TCGATGCGCA TCGCCGCGAT 
CTCGAGCAGG GCGTCGCGCT GCTGATCGCA AAGGAGACGC TGACCGCCGA GGAGTTCGCG 
CCGCTGCGGC CGGTGTCCAT GAAGGCACCG GCGGACGACG TCCGCGCGAC AGGTTGA 

 

Protein sequence

MESDPNTRKQ AIAVSYIFLA GVGMLLLQWL LTTYNTVETI PYSQFEQLVE QGKIAEVSVS 
QDTIQGKFKD KQQDGKTSFI TARVDPALAE KMASKGVTVT GVPSGGVIQT LLSWIVPALM 
FYLIWVFLGR KVMDRQGFGG LMSIGKSRAK VYVETDTKVT FADVAGVDEA KFELQEVVQF 
LKDPKSYGRL GAHVPKGILL VGPPGTGKTL LARAVAGEAG VAFFSISGSE FVEMFVGVGA 
ARVRDLFEQA RKAAPCIIFI DELDALGRSR TAGGGLGGYD EKEQTLNQLL AELDGFDPSA 
GVILLAATNR PEILDPALLR AGRFDRQVLV DRPDKGGRLA ILKVHVRKIT MAESVDLDKV 
AALTAGFTGA DLANLINEAA IAATRRRGHE VTFDDFTAAI ERIVAGLEKK SRVLNPAERR 
RVAYHEMGHA LVAANLAGVD PVQKVSIIPR GVGALGYTMQ RPTEDRFLLA VSELKNRIAV 
LMGGRASEQL IFDGDVSTGA ADDLQRATEI AIEMVTKYGM DATVGQRTYA PRPQASFLQP 
QDQLVSAAEQ TGREIDLAVR DLIAEGGARA RAILDAHRRD LEQGVALLIA KETLTAEEFA 
PLRPVSMKAP ADDVRATG