| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1837 |
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| Symbol | |
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| ID | 5154121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 1904065 |
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| End bp | 1905072 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640556789 |
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| Product | ABC transporter substrate-binding protein |
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| Protein accession | YP_001237946 |
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| Protein GI | 148253361 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.695215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAGCC TTGCCGTCCT CGCCTCGGCC TCTCAGGCCT GGGCTCAGCA GAAGACGCTG
TACGTTGCCG GCTATGGCGG CTCGTTCGAG AAGACGATCC GCGACGAGGT GATCCCGCCA
TTCGAGCAGG CCAACGGCGT GAAGGTCGAA TATGTCGCCG GCAATTCCAC CGATACGCTG
GCCAAGCTGC AGGCCCAGAA GGGCAACCAG CAGATCGACG TCGCCATCCT GGACGATGGT
CCGATGTATC AGGCGATCCA GCTCGGCTTC TGCGACAAGG TGACGGGCCT CCCCGGCGAT
CTCCTCGACA TCGCGCATTT CAAGGACGAC CGTGCCGTCG CCATCGGCCT CGTGGCCACC
GGCCTCATGT ACAACAAGAA GGTGTTTACC GAGAAAGGCT GGGCGCCGCC GACCTCGTGG
AACGACCTCA AGGACCCAAA ATACAAGCAG CAGCTGGTCA TTCCGCCGAT CAACAACACC
TACGGCCTGA ACGCCCTGTT GATGCTGGCG AAGATGAACG GCGGCAGCGA GACCAACGTC
GAGCCCGGCT TCAAGATCTT CAAGAACGAC ATCAATCCCA ACGTGCTGGC CTATGAGCCC
TCGCCGGGCA AGATGACCGA GCTGTTCCAG TCGGGCCAGG CCGTTATCGC GGTGTGGGGC
TCGGGCCGTG TGCAGAGCTT TGCGAACACC GGCTTCCCGG TCGACTTCGT CTATCCGAAG
GAAGGCGCCG TCAGCCTGCT GACGACGGCG TGCCCGATCG CCAAGACCTC GACCTCGCCT
TTGGCATCGA GCTTCATCAA GCTGCTGCTC GATCCGAAGA TCCAGCTCAC CATGCTCAAG
GAATATGGCT ACGGCCCGGT CGTGAAATCC GTCGTGGTGC CCGACGGCGT CGGCGCGATG
GCGCCGATCG GCGAGCGTGC GACCAAGGTC TATGCGCCCG ATTGGACCGT GGTCAACGAG
AAGCGCGAGG AATGGACCAA GCGCTGGAAT CGCGAGGTCG AGCGCTGA
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| Protein sequence | MVSLAVLASA SQAWAQQKTL YVAGYGGSFE KTIRDEVIPP FEQANGVKVE YVAGNSTDTL
AKLQAQKGNQ QIDVAILDDG PMYQAIQLGF CDKVTGLPGD LLDIAHFKDD RAVAIGLVAT
GLMYNKKVFT EKGWAPPTSW NDLKDPKYKQ QLVIPPINNT YGLNALLMLA KMNGGSETNV
EPGFKIFKND INPNVLAYEP SPGKMTELFQ SGQAVIAVWG SGRVQSFANT GFPVDFVYPK
EGAVSLLTTA CPIAKTSTSP LASSFIKLLL DPKIQLTMLK EYGYGPVVKS VVVPDGVGAM
APIGERATKV YAPDWTVVNE KREEWTKRWN REVER
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