Gene BBta_1822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1822 
Symbol 
ID5150054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1887290 
End bp1888141 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID640556774 
Producthypothetical protein 
Protein accessionYP_001237931 
Protein GI148253346 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCA CCATCGACGC GCATCAGCAT TTCTGGGATC CCGGCCGCGC CGACTATCCG 
TGGATGGCGG GCGATGCGCT GGCGCCGATC CGTCGCCCAT TCGGCCCTGC GGATCTCGCC
CCGCTGCTCG CTGAAAACGG TCTCGACGCC TCCATCCTGG TGCAGACCAG GTCATCGCTC
GACGAGACCG AGGAGTTCCT GCGCATTGCA CAGGAGACGC CGTTCGTTGC CGGTGTCGTC
GGCTGGGTCG ACCTGACCGA TCCGCAGCTC GACGCCACGA TCGATCGGCT GCGCCGCCTG
CCGGGCGGCG ACAGGCTGGT CGGCATCCGC CATCAGGTTC ATGACGAAGC CGATCCGGCG
TGGATCTATC GCGGCGATGT CAGGCGCGGC CTCGAGCGGG TCTTCGCTCA CGACCTGACC
TACGATCTCC TGGTCCGCAC GCGCGAGCTG CCGGCCGCGA TCGCGACGGC GCGCGCCTTT
CCGCAGGCGC ACTTTGTGCT GGACCACGCC GCCAAACCGC CGATCGCGAA CGGGTTCGAT
CAGAATTGGG CCGATCGCAT CGCGGAGCTC GCGGCCTGCG GCAACGTCTG GTGCAAGATC
TCAGGGCTGG CGACCGAGGC GATCTGGCGC GATTGGAACG CCGAGCGGCT TTCGCCCTAT
GTGGCGCATG TGGCGCGCTG CTTCGGCCCC GACAAACTGA TCTTCGGTTC GGACTGGCCG
GTCTGTCTGC TCGCCGGCCA CTATGGTGCC ATCAAGCAGG CGCTGGAGCA CTGCCTGACG
CAGCTCGGCT CCGATATCCG CAACAAGGCG TTCGGCCCCA ACACGATCGC TGCCTACCGG
CTGCCGGCCT GA
 
Protein sequence
MSRTIDAHQH FWDPGRADYP WMAGDALAPI RRPFGPADLA PLLAENGLDA SILVQTRSSL 
DETEEFLRIA QETPFVAGVV GWVDLTDPQL DATIDRLRRL PGGDRLVGIR HQVHDEADPA
WIYRGDVRRG LERVFAHDLT YDLLVRTREL PAAIATARAF PQAHFVLDHA AKPPIANGFD
QNWADRIAEL AACGNVWCKI SGLATEAIWR DWNAERLSPY VAHVARCFGP DKLIFGSDWP
VCLLAGHYGA IKQALEHCLT QLGSDIRNKA FGPNTIAAYR LPA