Gene BBta_1810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1810 
Symbol 
ID5155366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1876340 
End bp1877689 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content65% 
IMG OID640556765 
Producthypothetical protein 
Protein accessionYP_001237922 
Protein GI148253337 
COG category[R] General function prediction only 
COG ID[COG4249] Uncharacterized protein containing caspase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGGC GATTGGCGAT CGGTATTTTG GTCTTGGTGC TGCTCGGCGT GGCGCCCTGC 
AGGGCCGCGA GCCGGATCGC TCTGGTGGTC GGCAATTCGG ACTATCAAAG TGTCGGCAAG
CTTGCCAATC CGGCCAATGA TGCGCGCCTC GTCGCCGAGA CCTTTCAACG CCTGGGCTTC
ACCCTGGTCG GCGGAGCTGC ACAGCTCGAT CTCGACAAGT CGCGTTTCGA CCAGGTGATC
CAGACCTTCA GCAAGCAACT GCTCGGTGCT GAGGTCGCCG TGTTCTACTA CGCGGGCCAC
GGCATCCAGG TGCGCGGCAC CAACTACCTC GTGCCGATCA GCGCCAATCC GGCGCGCGAA
GCCGATGTCG ATTTCATGAT GGTCGATGTC GGCCTCGTGC TGCGCCAGAT GGAAGCGGCC
GGCACCAAGC TGAACATCGT CATCCTCGAT GCTTGCCGTA ACAATCCGTT CGGGGGACGC
GGCCTGCGAT CGAGCGATGG CGGCTTGGCG CAGATCCGCG CACCTGAAGG CACGATCCTG
TCCTACGCGA CGCAGCCCGG CAATGTGGCG CTCGATGGCG ATGATGGACA CAGCCCGTAC
ACGCGCGCGC TGGTCGATGC GGTGCAGCGG CCAGGGCTGG ACGTGCTGCA GGCCTTCAAC
CAGGTCGGCC TTTCCGTGAA GAAGGCCACG GCCAGCGCGC AGCAGCCCTG GGTCGCTTCG
TCCCCGATCG ATGGCTCCTT CTACTTCGCG GGGCCTGCGG ACGGGCAGTT GGCTGCTGCA
CCGGTCGCTG CAGCCGTCTC ACCGCCACCA GCACAGGCGC CGGCCATGGC CAGCGCGCCG
CGATCGGCCG AGTTCGTATT CCCGGACTCC GACCAGCGCT TGCTGTCCGC CGCCGACCTG
CAGGGACGTA CGAAGGACGA GCTTCGCATT GCCCGCAATG AAATCTTCGC GCGCCGCGGA
CGCTATTTCT CCTCGCCCGA GCTGACGGCC TATTTCGGCA GGTTCTCCTG GTACGTGCCG
CGCACCTGGG ATCCGGTCTT GAACCCGGTC GAGGCCGCCA ATGTCGATTT GCTCGATCGC
GCCGAAAATG GCGGGACCAG CGGATTCATC TTTCCCGACT CCGACCGCCG CCTGTTGACC
GCGGCCGAAC TGGCGCGGCT GTCCAAGGCC GAGTTGCGGC TGGCCAAGAA CGAAATCTTT
GCCCGGCGCG GGCGCTTCTT CGATGCGCCG GACCTCAAGG CCTATTTCGG TCGCTTCGCC
TGGTATGTGC CGTCGACCTG GAATCCGACC CTGACTGGGG TCGAGGAGAC CAACGTCAAG
CTGATTGATC AGATGAGCAG GCGGCCGTGA
 
Protein sequence
MMRRLAIGIL VLVLLGVAPC RAASRIALVV GNSDYQSVGK LANPANDARL VAETFQRLGF 
TLVGGAAQLD LDKSRFDQVI QTFSKQLLGA EVAVFYYAGH GIQVRGTNYL VPISANPARE
ADVDFMMVDV GLVLRQMEAA GTKLNIVILD ACRNNPFGGR GLRSSDGGLA QIRAPEGTIL
SYATQPGNVA LDGDDGHSPY TRALVDAVQR PGLDVLQAFN QVGLSVKKAT ASAQQPWVAS
SPIDGSFYFA GPADGQLAAA PVAAAVSPPP AQAPAMASAP RSAEFVFPDS DQRLLSAADL
QGRTKDELRI ARNEIFARRG RYFSSPELTA YFGRFSWYVP RTWDPVLNPV EAANVDLLDR
AENGGTSGFI FPDSDRRLLT AAELARLSKA ELRLAKNEIF ARRGRFFDAP DLKAYFGRFA
WYVPSTWNPT LTGVEETNVK LIDQMSRRP