| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1785 |
|---|
| Symbol | |
|---|
| ID | 5156225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 1854758 |
|---|
| End bp | 1855681 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640556741 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001237898 |
|---|
| Protein GI | 148253313 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGGC TTCTGTTTCT GAACGGCATC AAGGCATTCG AGGCGGCAGC CCGCACCGGC
AGCTTCGCCG CGGCGGGCAC CGAGCTCAAC GTCTCGGCCG CCGCGATCAG CCGCATGGTC
AACCTGCTGG AGCAGCGCCT CGGCGTCGTC CTGTTCGAGC GCAAGGCCAA CCGGCTGGCG
CTCACCGCGG CCGGCCGCGC CTATCAGAGC GGGCTCACCC CGATCTTCGA CGCGTTGTCC
AGCCTGACCG CGCAGATCAT GGCGCCGTCG TCGATGCGCG TGCTGACGCT GGGCGTCGGA
CCGACCTTCG CGATGAAATG GCTGATCCCG CGGCTCGCCG ATTTCAGCGA GGAGGAGCCC
GACATCGAGG TGCGCATCAC CACCGGCGGC GCGGCCGTGC CGTTCGGCGA CGATTGGAGC
TGCGGCATCC GACTGGGCGA TGGCGCCTGG CCGGGGCTCG TCGCCGAACC GCTGTTTGCC
GCCGACCTCG TGCCGGTATG CACGCCGCGG CTGGCTGCAA CCCTGAAGCG ACCGAGTGAC
CTCAAAGGAC CAAGCCTGCT GCGGGTGTCC CATGCCGCCG AGGACTGGTC ACTTTGGTTG
AAGGCTGCCG GAGTCTCGCG CATCACAGCA CGAGGTACGG AGTTTCAGTA TTACGGCCAT
GCGCTGCAAG CGGCTATCGA CGGGCTTGGC GTCGCGATGG GCATCCGCCC CTACATCGAT
GACGATCTCG CCGCCGGACG TTTGGTCGCA CCCTTTGCTC TGACGGTGCC AAAAGGCGAG
CGTTGGTATC TCGTCTATCG CAGCTTTCAA GCTGGCCAGC GCGACTTCAC CGCCTTCCGG
CGCTGGATCA TGCAGGCGGC GGCACTGTCC GCGACACGGA ATTCTCAGCG CAAGGAGGCC
AGCAAAAAAG ATGCAGCGGT GTGA
|
|---|
| Protein sequence | MRRLLFLNGI KAFEAAARTG SFAAAGTELN VSAAAISRMV NLLEQRLGVV LFERKANRLA
LTAAGRAYQS GLTPIFDALS SLTAQIMAPS SMRVLTLGVG PTFAMKWLIP RLADFSEEEP
DIEVRITTGG AAVPFGDDWS CGIRLGDGAW PGLVAEPLFA ADLVPVCTPR LAATLKRPSD
LKGPSLLRVS HAAEDWSLWL KAAGVSRITA RGTEFQYYGH ALQAAIDGLG VAMGIRPYID
DDLAAGRLVA PFALTVPKGE RWYLVYRSFQ AGQRDFTAFR RWIMQAAALS ATRNSQRKEA
SKKDAAV
|
|---|
| |