| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1782 |
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| Symbol | |
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| ID | 5156222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 1850770 |
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| End bp | 1853946 |
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| Gene Length | 3177 bp |
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| Protein Length | 1058 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640556738 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001237895 |
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| Protein GI | 148253310 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.674718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAGA CCTCCGACAC TCCCAAGAAG CCTGGCCGAA CTCCGAAATC CAAAGCGCAC
CGCCCGGACG TGCAGCCGAT CGCGCCGGCG CTCGCCGAAC TGCTCAACCC CGCCATCAAT
CGGGGTGAGA GCGGCATCGG TTCCTCAACG GGATTGAAGC CGCCGCCCGA CAATTCGTGG
GACCGTCGCA GCGGCGGCGA GGCGGCCGCG CATCGTGCCC GCGCGTCGAC CAAAGGCAAG
GGGGCCGATA TCGCCGGCCG CGATGCAGCC GACCATCCGA TGCCGATGCG GCCCAATCCC
CAGCCGGCTG GGGCTCGTCC GCTCGCGGCT GCGGACGGCG CCGCCGCGAC GCCGGGAGAT
GACGGGTCGA GCACCACGGA TGAAAGCCAG GCGCTGACCG GCCTCGCTGA AGCTCCGCAG
GCGACATACG GCACGGCCGC CACCATCCCG ACGCTCGATC CCGAGCTGGC GCGGCAGCTC
GGGCTGCCGA CCGCCGAGGA TGACGAGGAG GCGCTGGCGC GACCGCCGCG CAACAAGATG
GAGGCGCTGG GGGTCAAGGC CACGGCCGAG GCGCTGGAGG CCCTGATCCG CGAGGGCCGC
CCCGAGTTCC GCAGGGACGA CGGCTCGCTG AAACTGTGGA CGCCCCATCG GCCGCCACGC
CCGGACAAGT CGGAAGGCGG CGTCCGCTTC GAGATCAAAT CGGCCTACGA GCCCAAGGGC
GATCAGCCGC AGGCGATCGC GGAACTGGTC GAGGGCATCA ATCGCAACGA CCGCACCCAA
GTGCTGCTCG GCGTCACCGG CTCGGGCAAG ACCTACACCA TGGCCAAGGT GATCGAGGCG
ACACAGCGCC CGGCGATCAT TCTCGCCCCC AACAAGACGC TCGCTGCGCA GCTCTATGGC
GAGTTCAAGA GCTTCTTCCC GGACAATGCG GTCGAGTACT TCGTCTCGTA TTACGACTAT
TACCAGCCCG AGGCCTACGT CCCGCGCACC GACACCTATA TCGAGAAGGA CTCCTCGATC
AACGAGCAGA TCGACCGGAT GCGCCACGCC GCGACGCGTG CGCTGCTGGA GCGGGACGAC
GTCATCATCG TCGCCTCGGT GTCCTGCATC TACGGTATCG GCTCGGTCGA GACCTACACC
GCGATGACCT TTGCGCTGAA GAAGGGCGAG CGCATCGACC AGCGCCAGCT GATCGCCGAT
CTGGTCGCTC TGCAATACAA GCGCACCCAG CACGATTTCA CTCGCGGCAC CTTTCGGGTG
CGCGGCGACG TCGTCGACAT CTTCCCGGCG CACTACGAGG ACCGCGCTTG GCGGGTGAAC
CTGTTCGGCG ACACCGTCGA GAATATCGAG GAGTTCGATC CGCTCACCGG CCACAAGCAG
GACGAGCTCG AATTCATCAA GGTCTACGCG AATTCGCACT ATGTCACGCC GCGGCCGACC
CTGGTGCAGG CGATCAAGTC GATCAAGCAC GAGCTCAAGA TCCGGCTCGA CCAGTTGCAC
GCCCAGGGCC GCCTGCTGGA GGCGCAGCGG CTGGAGCAGC GCACCACCTT CGACATCGAG
ATGATGGAAG CGACCGGAAG TTGCGCCGGC ATCGAGAACT ATTCGCGCTA TCTGACCGGC
CGCCGCCCCG GCGAGCCGCC GCCGACCCTG TTCGAATACG TGCCCGACAA TGCGCTGGTG
TTCGCCGACG AGAGCCACGT CACCATCCCG CAGATCGGCG GCATGTTCCG CGGCGACTTC
CGCCGCAAGG CGACCTTGGC TGAATACGGC TTCCGCCTGC CCTCCTGCAT GGACAACCGC
CCGTTGCGGT TCGAGGAATG GGACATGATG CGGCCGCAGA CGGTGGCCGT CTCCGCGACG
CCCGGCGGCT GGGAGCTGAA CGAGGCCGGC GGCGTGTTCG TCGAGCAGGT CATCCGTCCG
ACCGGACTGA TCGACCCGCC GGTCGACATC CGTCCCGCCC GCACCCAGGT CGACGATCTG
CTCGGCGAGG TCCGCGCCAC CGCGCAGAAG GGCTATCGCT CGCTGATCAC GGTGCTGACC
AAGCGCATGG CCGAGGACCT CACCGAATAT CTGCACGAGC AGGGCATCCG CGTCCGCTAC
ATGCACAGCG ACATCGACAC GATCGAGCGC ATCGAGATCA TCCGGGACCT GCGGCTCGGC
GCGTTCGATG CGCTGGTCGG CATCAACCTG CTGCGCGAGG GCCTCGACAT TCCCGAATGC
GCGCTGGTCG CCATCCTCGA CGCCGACAAG GAAGGTTTTC TGCGCAGCGA GACCTCGCTG
ATCCAGACCA TCGGCCGCGC CGCCCGCAAC GTCGACGGCA AGGTGATCCT CTACGCCGAC
CAGATGACCG GCTCGATGGA GCGCGCCATC GCCGAGACCA ACCGTCGCCG CGAGAAGCAG
GTCGAGTACA ACACGGCCCA CGGCATCACG CCGGAGAGCG TCAAGAAGTC GATCGGCGAC
ATCCTCAACT CGGTCTATGA GCGCGACCAC GTGCTGGTCG AGACCGGCGG AGGCACCACC
ACCGATGACG TGATCTCGAT CGGGCACAAT TTCGAGACCG TGCTGGCCGA TCTCGAAACC
CGCATGCGCG AAGCCGCCGC GGATCTCAAC TTCGAAGAGG CGGCCCGCCT GCGCGACGAG
GTCAAGCGCC TGCGCGCCAC CGAGCTCGCC GTCGTCGACG ATCCCACCGC CAAGCAGCGC
ACCGTGCAGG GCAAGGCCGG CGCCTATGCC GGCGCCAAGA AATACGGCGA CGCCGCCAAT
TTGCCGACCA CAGCGATGAA GGGACGGGGC TCTGCCCGGA GCTCCTCGTC CCGCACCGGC
GGTCCCTCCG TTCCCTCCCC CCTCGTGGGG GAGGGTCAGG GAGGGGGGCC CACGAGTCGC
GGCGGCCGTG GCAGCGGAAA GTCCGGCAAC CGCGACCCGC TCGCGCCATC GCTCGACGAT
ATCCTCAGCG GCGGCTCACG CAGCGCCTCC AAAGTCCACA AGCCCCATCT CGACGAGATG
CACGGCCCGG AATCCCTGCC CTACCGTCCC AATGCCAAGC TGCCGCCAAA GCCCTTCGGC
GGCAGCAGCA AGATCATCCA GCCGACCAAC TCCCGCGAGT CCGGCCCCGA ATTCGGCCCC
GCCCCGCGCT CGACCGGCGG TGCTCCGGGA AAGCGCGGCG GGTGGAAGAA GCGGTAG
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| Protein sequence | MAKTSDTPKK PGRTPKSKAH RPDVQPIAPA LAELLNPAIN RGESGIGSST GLKPPPDNSW
DRRSGGEAAA HRARASTKGK GADIAGRDAA DHPMPMRPNP QPAGARPLAA ADGAAATPGD
DGSSTTDESQ ALTGLAEAPQ ATYGTAATIP TLDPELARQL GLPTAEDDEE ALARPPRNKM
EALGVKATAE ALEALIREGR PEFRRDDGSL KLWTPHRPPR PDKSEGGVRF EIKSAYEPKG
DQPQAIAELV EGINRNDRTQ VLLGVTGSGK TYTMAKVIEA TQRPAIILAP NKTLAAQLYG
EFKSFFPDNA VEYFVSYYDY YQPEAYVPRT DTYIEKDSSI NEQIDRMRHA ATRALLERDD
VIIVASVSCI YGIGSVETYT AMTFALKKGE RIDQRQLIAD LVALQYKRTQ HDFTRGTFRV
RGDVVDIFPA HYEDRAWRVN LFGDTVENIE EFDPLTGHKQ DELEFIKVYA NSHYVTPRPT
LVQAIKSIKH ELKIRLDQLH AQGRLLEAQR LEQRTTFDIE MMEATGSCAG IENYSRYLTG
RRPGEPPPTL FEYVPDNALV FADESHVTIP QIGGMFRGDF RRKATLAEYG FRLPSCMDNR
PLRFEEWDMM RPQTVAVSAT PGGWELNEAG GVFVEQVIRP TGLIDPPVDI RPARTQVDDL
LGEVRATAQK GYRSLITVLT KRMAEDLTEY LHEQGIRVRY MHSDIDTIER IEIIRDLRLG
AFDALVGINL LREGLDIPEC ALVAILDADK EGFLRSETSL IQTIGRAARN VDGKVILYAD
QMTGSMERAI AETNRRREKQ VEYNTAHGIT PESVKKSIGD ILNSVYERDH VLVETGGGTT
TDDVISIGHN FETVLADLET RMREAAADLN FEEAARLRDE VKRLRATELA VVDDPTAKQR
TVQGKAGAYA GAKKYGDAAN LPTTAMKGRG SARSSSSRTG GPSVPSPLVG EGQGGGPTSR
GGRGSGKSGN RDPLAPSLDD ILSGGSRSAS KVHKPHLDEM HGPESLPYRP NAKLPPKPFG
GSSKIIQPTN SRESGPEFGP APRSTGGAPG KRGGWKKR
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