| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1747 |
|---|
| Symbol | coxM |
|---|
| ID | 5156106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 1820341 |
|---|
| End bp | 1821204 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640556705 |
|---|
| Product | carbon monoxide dehydrogenase, medium subunit |
|---|
| Protein accession | YP_001237862 |
|---|
| Protein GI | 148253277 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.795465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.613894 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCAG GCCCGTTCGA CTATCACCGG CCGGCGAGTG TCGGCGACGC AGTCAAGCTG
CTCGCCGATC TCGGCGACGA AGCCCGCCCG CTCGCCGGCG GTCACAGCCT GCTGCCGATG
ATGAAGCTGA GGTTGGCGAC CCCGGCGCAT CTGATCGACC TGCACGGCAT CGCCGGCCTG
AAGGGGATCT GCCGCGACGG CGACCGCATC GTGATCGGCG CGATGACCAC GCAGGCCGAG
CTGCTGGCGT CGGCCGAGAT CGGAGAGAGA CTGCCGATCC TGCATGAGAC CGCGCTCCTG
ATCGCCGATC CGCAGGTGCG CTACCGCGGC ACGCTCGGCG GCAATGTCGC CAATGGCGAT
CCCGGCAACG ACATGCCGGC GCTGATGCTG GCACTGGATG CGAGCTATCG CCTCGAAGGT
CCGAACGGCG CCCGCGAGGT CGCGGCGCGT GAGTTCTACC AGGGCGCCTA TTTCACGGCG
CTCGAGCCCG GCGAGATCCT GACCGGCATC AGCATCCCCG TTCCGCCTGC CGGTCACGGC
TACGCCTATG AGAAGCTGAA GCGCAAGGTC GGCGATTACG CGACCGCGGC GGCCGGCGTG
GTGCTGACCA TGGCCGGCGG CAAGGTGGCG AGCTGCGTCA TCACGCTGAC CAATTTGCAC
GAGACGCCGC TGCTGGCCAC CGACGCGGCG AACGCCGTGA TCGGCACCAC GCTCGATGAC
GCTGCGCTGA AGGCGGCCGC AAGCGCAGCG CGCGCGATCA TGCAACCGGC CTCCGATGCG
CGCGGACCTG CCGAGTACCG CATCCATGTC GGCGGCATCA TGGTGATGCG CGCGCTGCAG
CGCGCGGCAA GCCGGGCGAG CTGA
|
|---|
| Protein sequence | MIPGPFDYHR PASVGDAVKL LADLGDEARP LAGGHSLLPM MKLRLATPAH LIDLHGIAGL
KGICRDGDRI VIGAMTTQAE LLASAEIGER LPILHETALL IADPQVRYRG TLGGNVANGD
PGNDMPALML ALDASYRLEG PNGAREVAAR EFYQGAYFTA LEPGEILTGI SIPVPPAGHG
YAYEKLKRKV GDYATAAAGV VLTMAGGKVA SCVITLTNLH ETPLLATDAA NAVIGTTLDD
AALKAAASAA RAIMQPASDA RGPAEYRIHV GGIMVMRALQ RAASRAS
|
|---|
| |