Gene BBta_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1742 
Symbol 
ID5152302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1815246 
End bp1815641 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content66% 
IMG OID640556699 
Productthioesterase superfamily protein 
Protein accessionYP_001237857 
Protein GI148253272 
COG category[R] General function prediction only 
COG ID[COG5496] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.117615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAC GTGAGATCAT CAAGCCGGGC ATGCGCGCCG AGCGGTTGCT CGTGGTGCCG 
CCGGAGCGCA CGGTCGGGCA CTTTGTTCCG CATATGCCGA TGGTCTATGC GACGCCGATG
ATGATCCTGG AAATGGAGAT GACCTCGGGC GACGCCATCA ATCCGGTGCT GCCGCCGGGC
TGGGTCACGG TCGGCACCGA GGTCAATGTC CGCCACCTCG CAGCGTCACC GGTCGGCGCC
ACCATCCGCA CGGTCGCCGA GGTGATCGAG GTCGAGCGCC GCGTCATCCG CTTCAGCGTC
GAGGCCTATC ACGGCGAGAC CAAGATCGGC GACGGCCGTC ACGGCCGCGG GCTGATCAAT
GTCGAGCAGT TCAAGAAGCG GTTCGCCGTG CCGTAG
 
Protein sequence
MDAREIIKPG MRAERLLVVP PERTVGHFVP HMPMVYATPM MILEMEMTSG DAINPVLPPG 
WVTVGTEVNV RHLAASPVGA TIRTVAEVIE VERRVIRFSV EAYHGETKIG DGRHGRGLIN
VEQFKKRFAV P