| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1732 |
|---|
| Symbol | |
|---|
| ID | 5153423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 1805807 |
|---|
| End bp | 1806508 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640556689 |
|---|
| Product | putative ribonuclease T2 family protein |
|---|
| Protein accession | YP_001237847 |
|---|
| Protein GI | 148253262 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG3719] Ribonuclease I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.370011 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAAT GCCTGCGCCG ACCTGCCGCC CTGCTGTTCA GAACGGCCGC CTGTATCGCG
TTGCTCTGCG CCCTCGGGGC CGGGCCCGCC GGCGCCCAGG ACCGGCGCCA GAACGCGCCG
GGCGCGTTCG ATTTCTACGT GCTGTCGCTC TCCTGGTCGC CCTCGTTCTG CGCCGAGGCC
GAAGAGCGCG GCGGCCGCGG CAGCCGCTCC CAGCAATGCA GCGGACGGCC CTATTCGTTC
GTCGTGCATG GGCTTTGGCC GCAATATGAA AATGGCTATC CCGAATATTG CGAGCAGCCG
GCGCCGCGCC TGCCGCGCAA CATCATGACC TCGATGCTCG ATCTGATGCC GGCGCCGGGG
CTGATCTACA ACGAGTGGGA CAAGCACGGC ACCTGCGCCG GCCTGTCCGC GAAGACCTAT
TTCGAAACCA TCCGCAAGGC ACGCGCCGCG ATCAAGATCC CGGAGGAATT CCTCGATTTG
TCGCAGGCCA AGACGGTCAC CCCCACCGCG GTCGAGGAGG CCTTCATCAA GGCCAATCCC
AAGCTCACCA GTTCGGCCAT CGCCATCACC TGCAACCGCA CCCGGTTGAG CGAGGTGCGG
ATCTGCCTGT CGAAGGATCT GGAATTCCGC AACTGCGACG AAGTCGATCG CCAGGCCTGC
CGCCGCGACG AGGTCAACAT GCCGCCGGTC CGCGGCGGCT AG
|
|---|
| Protein sequence | MFECLRRPAA LLFRTAACIA LLCALGAGPA GAQDRRQNAP GAFDFYVLSL SWSPSFCAEA
EERGGRGSRS QQCSGRPYSF VVHGLWPQYE NGYPEYCEQP APRLPRNIMT SMLDLMPAPG
LIYNEWDKHG TCAGLSAKTY FETIRKARAA IKIPEEFLDL SQAKTVTPTA VEEAFIKANP
KLTSSAIAIT CNRTRLSEVR ICLSKDLEFR NCDEVDRQAC RRDEVNMPPV RGG
|
|---|
| |