Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1730 |
Symbol | cspA |
ID | 5154572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 1804356 |
End bp | 1804571 |
Gene Length | 216 bp |
Protein Length | 71 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640556687 |
Product | cold-shock DNA-binding protein family protein |
Protein accession | YP_001237845 |
Protein GI | 148253260 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.244991 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATGA CTGGGACAGT CAAATTCTTC AATGGTGAAC GCGGCTACGG CTTCATCAAG CCGGACGATG GTGGGCGCGA CGTGTTCGTG CATATCACGG CAGTGGAGCG CGCCGGCTTG AAGGATCTGA GCGAAGGACA GCGTATCAGC TTCGAGGTCG AGCCGGACAA GAAGGGCAAG GGCCCCAAAG CGGTGAACTT GGTGCTGTCG TCCTAG
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Protein sequence | MAMTGTVKFF NGERGYGFIK PDDGGRDVFV HITAVERAGL KDLSEGQRIS FEVEPDKKGK GPKAVNLVLS S
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