| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1717 |
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| Symbol | ribF |
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| ID | 5154807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 1791008 |
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| End bp | 1791988 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640556674 |
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| Product | FMN adenylyltransferase / riboflavin kinase |
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| Protein accession | YP_001237832 |
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| Protein GI | 148253247 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0196] FAD synthase |
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| TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00388898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.218182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCTT TCACGATCAT CCGCGACACC ACCCCGCCGG CCGACATCAT CAAAGGCGCG
GTGGTGGCGA TGGGAAATTT CGACGGCGTC CATCTCGGCC ACCGGGCCGT GATCGAGGCG
GCGGTCGAAA TGGGCAAGAG TCACGGCCGT CCGGCGCTGG CCCTGACCTT CGAGCCGCAT
CCACGGCGCT TCTTCAGCCC CAACACACCG CAATTCCGAC TCACCGACGA ACGCGCCAAG
CTGCGGCTGT TGGCCGGAAC CGGGCTGCAG GGCGCCGTCG TCATGACCTT CGACAAGGGC
CGTGCCCAGA CCTCGGCGCA GGATTTCATT CACCATGAAC TGATCGGCCG CCTCGGCGTC
GCCGGGATCG CGGTCGGCTA CGACTTTCAT TTCGGCAAGG GCCGCGTCGG CTCGCCCACT
CTGCTCGCCA GCGAGGCCCC CAAACTGGGC ATCGAGGTGG ACGTGCAGCC CCATGTCGAC
ATCGACGAGC GGCCGGTCTC TTCGACCGCG ATCCGCGAGG CGCTGGCCGA GGGCCAGGTC
GCCGAGGCCA CCGCGATGCT CGGCGGCCCC TGGTTCGTGA CCTCGGAGGT CATCCATGGC
GAGAAGCGCG GCCGCGATCT CGGCTACCCC ACCGCCAATA TGCGGCTCGA CCGCGATTGC
GGCCTGCGCC ACGGCATCTA TGCCGTCCGG GTTGGCCGCG GCCGCGGTGC GAACCGGGTG
CTGATCGACG GCGTCGCCAA TTTCGGCCGC CGGCCGACCT TCGACAATGG CGCGCCGCTG
CTCGAGACCT TCCTGTTCGA CTTCAAGGAC AGCCTCTATG GCGAGGTCCT GGATATCGCT
TTCATCGGCT TCATCCGCGA GGAGGCGAAA TTCAGCTCGA TCGAGGCCCT GATCCGGCAG
ATGGACGACG ACAGTGCCAA GGCCCGCGCC CTGCTTCAGG CGAATGCAGG CCTCTTCCCC
CGGCTCGGCG AGATCGAATA G
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| Protein sequence | MAAFTIIRDT TPPADIIKGA VVAMGNFDGV HLGHRAVIEA AVEMGKSHGR PALALTFEPH
PRRFFSPNTP QFRLTDERAK LRLLAGTGLQ GAVVMTFDKG RAQTSAQDFI HHELIGRLGV
AGIAVGYDFH FGKGRVGSPT LLASEAPKLG IEVDVQPHVD IDERPVSSTA IREALAEGQV
AEATAMLGGP WFVTSEVIHG EKRGRDLGYP TANMRLDRDC GLRHGIYAVR VGRGRGANRV
LIDGVANFGR RPTFDNGAPL LETFLFDFKD SLYGEVLDIA FIGFIREEAK FSSIEALIRQ
MDDDSAKARA LLQANAGLFP RLGEIE
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