Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1705 |
Symbol | |
ID | 5154869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 1778059 |
End bp | 1779627 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640556662 |
Product | oxidoreductase |
Protein accession | YP_001237820 |
Protein GI | 148253235 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.318945 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAT TCGATCAGAA CGATTCGAGC GTCGTCGTCA TCATCGGCTC GGGTGCCGGC GGCGGCACGC TCGGCAACGA GCTTGCGCAG AAGGGCATCA AGGTCGTTAT TCTCGAAGCC GGCAATCGCT ACGAGATTCC GGACTTCATC AACGATGAAT GGGAGAGCTT CACCCAGCTC GCCTGGACCG ACATGCGCAC GACGTCCGGC ACCTGGCGGG TGGCGAAGGA CTTCGCCAAT CTGCCGGCCT GGATCGTGAA GGCGGTCGGC GGCTCCACCG TGCACTGGGC CGGCGCCTCG CTGCGCTTCG AGGAGCACGA GTTCAAGGCC CGCACCACCT ATGGCGGCGT GCCCGGCGCG AGCCTGATGG ACTGGCCGGT GACGCTCGCC GAGATGGAGC CGTGGTACGC CAAGGCCGAG TTCAAGATGG GCGTGACCCG CACCAACGAC ATTCCCGGCC TGCCCGGCAA CAACAACTTC AAGGTGCTCG AGGCCGGCGC CCGCAAACTC GGCTACAAGA CCGTGCACAC CGGCAACATG GCGATCAACT CGCAGCCGCG CGACGGCCGC GGCGCCTGCC AGCAGATCGG CTTCTGCTTC CAGGGCTGCA AATCCGGAGC GAAATGGTCG ACCCTGTACA CCGAGATCCC GAAGGGCGAG GCCACCGGCA ATCTCGAAGT GCGTTCCGGC AGCATGGCGA TCAAGATCGA GCATGATGCC TCCGGCAAGG TCACCGGCGT GGTCTATGCC GACAGCCAGG GCAAGATGCA GTTGCAGAAG GCCCGCATCG TCGCCGTCGC CGGCAACTCG ATCGAGAGCC CGCGGCTCCT GCTCAACAGC GCCTCGAACC TGTTCCCGGA CGGCCTCGCC AACTCCTCCG GCCAGGTCGG CCGCAACTAC ATGCGGCACA TGACCGGCAG CGTCTATGCG ACGTTCGAGA ACCCGGTGCA CATGTATCGC GGCACCACGA TGGCCGGCAT CGTCCGCGAC GAGGCAGCGT TCAATCCGAA GCGCGGCTTC GTCGGCGGCT ATGAGATGGA AACGCTGTCG CTCGGCCTGC CGTTCATGGC GGCGTTCCTC AATCCCGGCG CCTGGGGCCG CAGCTTCACC GCGGCCATGG AGACCTATCC GCGCATGGCC GGCATGTGGC TGGTCGGCGA GGACATGCCG CAGGAGACCA ACCGCATCAC GCTCGACCCG GTCGCCAAGG ACAAGTTCGG CATGCCGGTG GCGTCAGTGC ATTTCGACGA TCATCCGAAT GACGTCGCGA TGCGCGCCCA CGCCTACAAG CAGGGCTCGG CGATCTACGA GGCGGTCGGC GCCACCGTGA CCTATCCGAC CACGCCCTAT CCCTCGACGC ATAATCTCGG CACCAACCGG ATGAGCGAGA AAGCCAAGGA CGGCGTCGTC AACAAGTTCG GCCAGACCCA CGACATCAAG AACCTGTTCG TCTCCGACGG CAGCCAGTTC ACCACGGGCG CGGCGTGCAA CCCCACGCTG ACCATCGTGG CGCTGGCGAT CCGCCAGGCC GACTACATCG CGGGCGCGAT GCAGAAGAAG GAGATCTGA
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Protein sequence | MAKFDQNDSS VVVIIGSGAG GGTLGNELAQ KGIKVVILEA GNRYEIPDFI NDEWESFTQL AWTDMRTTSG TWRVAKDFAN LPAWIVKAVG GSTVHWAGAS LRFEEHEFKA RTTYGGVPGA SLMDWPVTLA EMEPWYAKAE FKMGVTRTND IPGLPGNNNF KVLEAGARKL GYKTVHTGNM AINSQPRDGR GACQQIGFCF QGCKSGAKWS TLYTEIPKGE ATGNLEVRSG SMAIKIEHDA SGKVTGVVYA DSQGKMQLQK ARIVAVAGNS IESPRLLLNS ASNLFPDGLA NSSGQVGRNY MRHMTGSVYA TFENPVHMYR GTTMAGIVRD EAAFNPKRGF VGGYEMETLS LGLPFMAAFL NPGAWGRSFT AAMETYPRMA GMWLVGEDMP QETNRITLDP VAKDKFGMPV ASVHFDDHPN DVAMRAHAYK QGSAIYEAVG ATVTYPTTPY PSTHNLGTNR MSEKAKDGVV NKFGQTHDIK NLFVSDGSQF TTGAACNPTL TIVALAIRQA DYIAGAMQKK EI
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