| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1695 |
|---|
| Symbol | xseA |
|---|
| ID | 5155386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 1767067 |
|---|
| End bp | 1768677 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640556652 |
|---|
| Product | exodeoxyribonuclease VII large subunit |
|---|
| Protein accession | YP_001237810 |
|---|
| Protein GI | 148253225 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1570] Exonuclease VII, large subunit |
|---|
| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.85082 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCCG CAGAAGCCCT GCCCAACGCG CCCGAATTTA CCGTCTCCGA ACTGTCCTCC
GCGCTGAAGC GGACGGTCGA GGACCAGTTC GGCCATGTCC GGGTGCGCGG CGAGATCACC
GGCTTCCGCG GACCGCATTC CTCGGGCCAT TGCTATTTCG CGCTCAAGGA CGAGAGCGCC
AAGATCGAGG CGGTGATCTG GAAGGGCGTG CACGGCCGCA TGCGCTTCAA GCCCCAGGAA
GGGCTCGAGG TCATCGCCAC CGGCAAGCTC ACCACCTATC CGAACTCCTC GAAATATCAG
ATCGTCATCG AGGCGCTGGA GCCGGCCGGC ATCGGCGCGC TGATGGCGCT GATGGAGGAG
CGCAAGCGCA AGCTCGGCGC CGAAGGCCTG TTCGATCCCG CCCGCAAGCA GCTGCTGCCC
TGGCTGCCCG AGGTGATCGG CGTCGTCACC TCGCCAACCG GCGCCGTCAT CCGCGACATC
CTGCACCGGT TGGAAGACCG CTTTCCCCGC CACGTGCTGG TGTGGCCGGT GAAGGTGCAG
GGCGAAGGCT CGGCCGAGCA GGTCGCGGCC GCGATCCGCG GCTTCAACGA TCTGCCGGAG
GACGGCCCGA TTCCACGTCC CGACGTGCTG ATCGTCGCGC GCGGCGGCGG CTCGCTGGAG
GACCTCTGGT CCTTCAACGA GGAGATCGTG GTTCGCGCCG CAGCCGAGAG CATGATCCCG
CTGATCTCGG CGGTCGGGCA CGAGACCGAC GTGACCCTGA TCGATTTCGC CGCGGACAAG
CGGGCGCCGA CGCCCACGGC CGCTGCGGAA ATGGCGGTGC CGGTGCGCAG CGAGCTGATG
CAGGAGGTCG CGAGCCTCGC CCGCCGCGTC AGCGTCTGCT GGCAGCGCAG CCAGGAGGGC
CGCCGCAACG AACTGCGTGC GGCCGCGCGC GCCCTGCCCG GAGCAGCCGA GCTGCTCGCC
ATTCCGCGGC AGCGGCTGGA TTCGGCCGCG GCAAGCCTGC CGCGCGCGCT GAAAACCAAC
ACCAATGTGC ATTTCCGCCA GTTCGCGGCG GCCAGCGCCA AGCTGACCTT GCGCGTGCTG
CATGGGCAGA TCGCGCAGGC CGATCATCGT CTCATCGTGT CCTCGGAGCG GCTGTCACTG
TCGGCGCGGG CGCTGCTGCA CCGGCGTCGC GAGCGGTTCG AAGCGCTCGA CGCCCGCTTC
AAGGCGTCTC GCCTCGCTTA TGCCCAGGCC AAGCGACAAG CGATCGAACG CGAGCGCGAC
CGCACCGAGC GGCTCGCGGA TCGCGCGGCC CGCGCGCTGG CGACGTCGAT CTCGCGGCTG
TCGGCGCGCG TCGACCACGC CGGCCAGCTG CTGGCGGCGT TGTCCTATCG CAGCGTGCTG
GCGCGCGGCT TCGCCCTGGT CCGCGATGAT GCCGGTCACC CGCTGCACCA GGCCGCAAGC
ATCGGCCCCA ACGCCGCGCT CTCGATCGAG TTCGCCGATG GCGTGGTCGC AGCGACGGCC
GCTGCCGGCC GCGCGGCACC AGTGGCAGCG CCGCCCAAGA CCGCACGCGA GACCAAGCCG
GCGGCAGCGA AGCGCTCACC CGATCCGGCC GATCAAGGCA GCCTTTTCTA G
|
|---|
| Protein sequence | MPPAEALPNA PEFTVSELSS ALKRTVEDQF GHVRVRGEIT GFRGPHSSGH CYFALKDESA
KIEAVIWKGV HGRMRFKPQE GLEVIATGKL TTYPNSSKYQ IVIEALEPAG IGALMALMEE
RKRKLGAEGL FDPARKQLLP WLPEVIGVVT SPTGAVIRDI LHRLEDRFPR HVLVWPVKVQ
GEGSAEQVAA AIRGFNDLPE DGPIPRPDVL IVARGGGSLE DLWSFNEEIV VRAAAESMIP
LISAVGHETD VTLIDFAADK RAPTPTAAAE MAVPVRSELM QEVASLARRV SVCWQRSQEG
RRNELRAAAR ALPGAAELLA IPRQRLDSAA ASLPRALKTN TNVHFRQFAA ASAKLTLRVL
HGQIAQADHR LIVSSERLSL SARALLHRRR ERFEALDARF KASRLAYAQA KRQAIERERD
RTERLADRAA RALATSISRL SARVDHAGQL LAALSYRSVL ARGFALVRDD AGHPLHQAAS
IGPNAALSIE FADGVVAATA AAGRAAPVAA PPKTARETKP AAAKRSPDPA DQGSLF
|
|---|
| |