| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1668 |
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| Symbol | glcA |
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| ID | 5155304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1742009 |
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| End bp | 1743673 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640556626 |
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| Product | LctP family glycolate permease |
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| Protein accession | YP_001237784 |
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| Protein GI | 148253199 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1620] L-lactate permease |
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| TIGRFAM ID | [TIGR00795] L-lactate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.646822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGAATC AAATCTACGA CCCGTTGGGG AGCCCGGCGC TGTCGACGCT GGCGGCGGCC
GTGCCGGTGG TGACGCTGCT GGTGCTGATC GCCAGCGGCA AGGTGAAGGC GCATATCGCG
GCGATCATCG CCGTGATCCT GACCAACCTG ATCACGATCT TCGTCTTCAC GATGCCGGCC
AACATGTCGC TGCGCGCGAC GTTCCTCGGC GTCGTGACCG GCTTCTTCCC GATCGGCTGG
ATCGTGCTGA ACGTCATCTT CCTCTACCAG GTCACGGTCT CGACCGGCCG CTTCGAGCTC
TTGAAGCGGG CGATCGGCGG CGTCACCGAG GACCGCCGTC TGCAACTCCT GCTAGTCGCC
TTCTCGTTCG GCGCGTTCTT TGAGGGCGCG TCGGGCTTCG GCACCCCGGT GGCGATCACC
GGCGCCGTGC TGATCGGACT CGGCTTCTCG CCGCTGGCGG CCTCCGGCCT GTCGCTGATC
GCCAACACGG CGCCGGTGGC CTATGGCGCG CTGGGCACGC CGATCCAGGG CCTCGCCTCG
GTGACCGGTC TCGACCCCTA CATTCTCGGC GCCATGGTCG GCCGTCAGCT GCCGGTGTTC
TCGCTGATCG TGCCGTTCTG GGTGATCTGG GCGTTCGCGG GCTGGAAGGG CATGAAGGAC
GTCTGGCCGG CGATTCTCGT CACCGCCATC TCCTTCGCTG TGCCGCAGTT CCTGATTTCG
AACTACGTCA ATCCGTGGAT CGTCGACATC GGCGCTTCGC TGATCTCGAT GGGCGCGCTG
ATCCTGTTCC TGAAGGTCTG GCAGCCGCGC CAGCTCTGGC TGTCGCCGGC GCTGCGTGGC
CGTGACGAAT CGGCCGCCAC GATGGCGGCG CAGAAGCCGC TCGACCGCAC GCCGCTGACG
CAAGCCGAAC TGTGGGGCGC GCTGCTGCCC TGGATCATCG TCTGCGTGAT CATGCTGATC
TGGGGCAATG GCGCCTTCAA GAGCTGGGCG AATTCGATCT TCACCTGGAG TTATCCGGTC
CCGGAGCTCG ATAAGCTGAT CAACAAGATG CCGCCGGTGG CGGCGAAGCC GACGCCTGAA
GGCGCCGTCT TCTCGTTCAC CTATCTGACC TTCACCGGCA CCGGCATGCT GATCGCTGCG
ATCATCTCCG GCTTCCTGAT GGGGGTCGGG CCGGGCAGAC TGATCGCCGA ATATGGCCGC
ACCATCCGGC TCTGCGCGAT CTCGCTGATC ACGATCTCGG CCATGCTGGC GATCGGCACG
CTGACCCGGC TGTCCGGTGT GGACGCGACG CTCGGCCTCG CTTTTGCGGC GACCGGCGTG
CTCTACCCGT TCTTCGGCAC CCTGCTCGGC TGGTTGGGCG TGGCGCTGAC GGGATCGGAC
ACCGCCTCCA ACGTGCTGTT CGGCAATCTG CAGAAGATCA CCTCGGAGCA ACTCGGCCTG
TCGCCGGTGC TGATGGCGGC CGCCAACTCG TCCGGCGGCG TCATGGGCAA GATGATCGAT
GCGCAATCGA TCGTGGTCGC CTCGACCGCC ACCAATTGGT ACGGCCATGA GAGCTCGATC
CTGCGCTACG TCTTCCTGCA CTCGATCGTG CTGGCCTGCT TGGTCGGCCT GTTCGTGACC
TTGCAAGCCT ATGTCTATCC GTTCACCGCG ATGGTGCTGA AGTAG
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| Protein sequence | MWNQIYDPLG SPALSTLAAA VPVVTLLVLI ASGKVKAHIA AIIAVILTNL ITIFVFTMPA
NMSLRATFLG VVTGFFPIGW IVLNVIFLYQ VTVSTGRFEL LKRAIGGVTE DRRLQLLLVA
FSFGAFFEGA SGFGTPVAIT GAVLIGLGFS PLAASGLSLI ANTAPVAYGA LGTPIQGLAS
VTGLDPYILG AMVGRQLPVF SLIVPFWVIW AFAGWKGMKD VWPAILVTAI SFAVPQFLIS
NYVNPWIVDI GASLISMGAL ILFLKVWQPR QLWLSPALRG RDESAATMAA QKPLDRTPLT
QAELWGALLP WIIVCVIMLI WGNGAFKSWA NSIFTWSYPV PELDKLINKM PPVAAKPTPE
GAVFSFTYLT FTGTGMLIAA IISGFLMGVG PGRLIAEYGR TIRLCAISLI TISAMLAIGT
LTRLSGVDAT LGLAFAATGV LYPFFGTLLG WLGVALTGSD TASNVLFGNL QKITSEQLGL
SPVLMAAANS SGGVMGKMID AQSIVVASTA TNWYGHESSI LRYVFLHSIV LACLVGLFVT
LQAYVYPFTA MVLK
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