Gene BBta_1667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1667 
Symbol 
ID5155303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1739923 
End bp1741689 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content65% 
IMG OID640556625 
Productputative ABC transporter (fused ATP-binding and permease components) 
Protein accessionYP_001237783 
Protein GI148253198 
COG category[R] General function prediction only 
COG ID[COG4178] ABC-type uncharacterized transport system, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAATC TGCGCTCGAC CCTCGCCATC GTGTGGCGGA TCGCCATTCC CTACTTCCGC 
TCCGAGGACA AGGTCGCCGG CCGCTCCCTG CTCGCCGCCG TGATCGCCAT CGAGCTTTCG
CTGGTCGCCA TCGATGTGCT CGTGAACCAG TGGTATAATC GGTTCTACAA TGCGCTTCAG
GACCGCAATT GGAGCACCTT CACCTGGGAG CTTGGCGTCT TCATCGTCCT GGCAAGCGTC
AGCGTCGCAC TCTCCGTCTA CCAGCTCTAT CTCAATCAAT GGCTTCAGAT CCGGTGGCGC
CAATGGATGA CGCGGGTCTA TCTCAGCCAA TGGCTCGACC GGGCCAACCA TTACCGCATG
CAGCTTAAGG GCGACGCAGC CGACAACCCG GATCAGCGCA TCGCCGATGA CGTGCAGATG
TTCGTCGAAA AGACGCTGAG CATCACGATC GGCCTGCTGA GCTCGATCGT CACACTGGCC
TCGTTCGTCG TGATCCTGTG GGGGCTTTCC GAGGCCGCTC CGCTGACCAT CGGCGGCCAG
GAATTCGCCA TTCCGGGCTA TCTGGTGTGG GCGGCGCTGA TCTACGCCAT CTTCGGCACG
GCACTGACGC ATTGGATCGG CTCGCCCCTG GTGAACCTGT CGTTCCAACA GCAGCGCTTC
GAAGCCGATT TCCGCTTCAA TCTGGTGCGC GTTCGCGAAA ATTCCGAGCA GATCGCGCTG
CTGCGGGGCG AGCATGCCGA GCGCGGGCGC CTGATGGATC GCTTCGGCAG CGTCATCGAC
AACTGGTACA GCATCATGAG CCGGACCAAG CGGCTGACCG CCTTCACGGC CAGCTACTCG
CAAGCCGCCG TGATCTTCCC CTTTATCCTG ACCGCCCCCG CCTATTTTGC CGGCAAGATC
CAGCTAGGTG GCATGCTGCA GACCTCGTCG GCCTTCGGGA GCGTGCAGAA GGCGCTGTCG
TTCTTCGTCA GCGCCTATCG CACCCTGGCG GACTGGCGCG CGATCGTGGC TCGACTTGAT
GGCTTCGAGA TGTCGATCGA GAGCGCTGCC ACGCTCTCCA GCGAGCCGCA GACAGTCGGC
GTGGTGGACC ATGCCGGCGA CAGCATCGAG CTCGCCCAGC TGCTGTTGAA GCTCCCGAAC
GGCCTGCCGC TGATCGCGGC CGACGGGTTC AGCATCAAGA GCAGCGAGCG CACGCTGCTG
ACCGGGCCAT CCGGCGCCGG CAAGTCGACC TTGTTCCGCG CCATCGCCGG CGTCTGGCCG
TTCGGCAGCG GCGCCATCAG CGTACCTGCG CATGCCAAGC TCATGATGCT GCCGCAGCGC
CCGTATTTCC CGATCGGCAC GTTGCAGGCC GCGATCGTCT ACCCGGCTGC TCCGGACCGT
TTCAGTGTCG AGCAGGTCAA GGATGCGGTC GCTGCGGTCG GGTTGCCGCA GCTGGCGGAC
CGGCTGGACG AGGACGCGCA TTGGAATCGC ATGCTGTCGC TCGGCGAGCA GCAGCGCCTC
GGGATGGCCC GCGCCCTGCT GCATGGCCCG CAATACCTGT TCCTGGACGA AGCCACAGCC
TCGCTGGACG AGCCGAGCGA AGCGCGACTC TATCGCGTGA TCGCCGAGCG CCTGCCGCAG
ACCACGGTCG TCTCGATCGG CCACCGCTCC ACCCTGCACG ACTTCCATGA CCGCAAGGTC
GAACTGATTC GGGAGGGCGA CCGGTTCACG CTGCGGCCAA CCACGCCGGC GGCAGCGGCG
GACGCCCCGA CGGGTGGCGC GGAGTAG
 
Protein sequence
MNNLRSTLAI VWRIAIPYFR SEDKVAGRSL LAAVIAIELS LVAIDVLVNQ WYNRFYNALQ 
DRNWSTFTWE LGVFIVLASV SVALSVYQLY LNQWLQIRWR QWMTRVYLSQ WLDRANHYRM
QLKGDAADNP DQRIADDVQM FVEKTLSITI GLLSSIVTLA SFVVILWGLS EAAPLTIGGQ
EFAIPGYLVW AALIYAIFGT ALTHWIGSPL VNLSFQQQRF EADFRFNLVR VRENSEQIAL
LRGEHAERGR LMDRFGSVID NWYSIMSRTK RLTAFTASYS QAAVIFPFIL TAPAYFAGKI
QLGGMLQTSS AFGSVQKALS FFVSAYRTLA DWRAIVARLD GFEMSIESAA TLSSEPQTVG
VVDHAGDSIE LAQLLLKLPN GLPLIAADGF SIKSSERTLL TGPSGAGKST LFRAIAGVWP
FGSGAISVPA HAKLMMLPQR PYFPIGTLQA AIVYPAAPDR FSVEQVKDAV AAVGLPQLAD
RLDEDAHWNR MLSLGEQQRL GMARALLHGP QYLFLDEATA SLDEPSEARL YRVIAERLPQ
TTVVSIGHRS TLHDFHDRKV ELIREGDRFT LRPTTPAAAA DAPTGGAE