Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1662 |
Symbol | glcD |
ID | 5154133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 1733510 |
End bp | 1735003 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640556620 |
Product | glycolate oxidase, subunit GlcD |
Protein accession | YP_001237778 |
Protein GI | 148253193 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATCA TGATGCCGGA AGCTGATCAG GCGGTGTTGG CACGGCGTGA CCAGATCGTT GCTGCACTGC GTGCGATCGT ACCGGGAGAG GGCGTCATCG ACAGCGCTGC CGAAATGCTC CCTTACGAGT CTGACGGGTT GATGGCCTAT CGGCAGCCGC CGATGGTCGT GGTGCTGCCG GAGACCACGG CACAGGTGGC CAAGGTCCTG AAGTACTGCC ACGAGCAAGG CATCAAGGTG GTTCCCCGCG GCTCGGGAAC GTCACTGTCG GGCGGCGCGC TGCCGCTCGC CGACGGCGTG CTGCTCGGGC TTGGCAAGTT CAAGCGGATC CGCGAGATCG ACTTCGACAA CCGCGTCGTC GTGACCGAGC CCGGCGTCAC CAACCTCGCC ATCAGCCAGG CGGTCGCGCA TGCCGGCTTC TACTACGCGC CCGATCCGTC CTCGCAGATC GCCTGCTCGA TCGGTGGCAA TGTCGCGGAG AATTCCGGCG GCGTGCATTG CCTCAAATAC GGCATGACCA CCAATAACGT GCTCGGTTGC GAGATCGTGC TGATCAATGG CGAGGTGTTG CGGATCGGAG GCAAGTGCGC CGAGAACGCC GGCTACGATC TGATGGGGCT GATCACGGGA TCCGAGGGGC TGCTCGGCGT GGTCACCGAG GTGACCGTCC GGATTCTGCA GAAGCCGGAG ACGGCGCGGG CGCTGATGGT CGGGTTTTCC GAGGTCGAAG CTGCCGGCGA ATGCGTGGCG CGCATCATCG GAGCCGGCAT CATCCCCGGC GGCATGGAGA TGATGGACAA GCCTGCGATC CACGCCGCCG AGGCCTTCGT TCATGCCGGC TATCCGCTGG ACGTGGAGGC GCTCTTGATC ATCGAGCTCG ATGGCCCCGG CGTGGAGGTC GACGAACTGA TCGGCCGCGT CGAGGCGATC GCCAATGGCT GCGGCTCGAC GACATGTCGC ATCTCGACCT CCGAGGCCGA GCGCAACTTG TTCTGGGCAG GGCGCAAGGC CGCCTTTCCG GCCGTCGGCC GGATCTCGCC GGACTATCTT TGCATGGACG GCACGATCCC GCGCGGCGCA TTGCCGAAGG CGCTGGCGCG GATCCGCGAG CTGTCGGAGA AGTACCAGCT CGGCTGCGCC AATGTGTTTC ATGCCGGCGA TGGCAATCTT CACCCGCTCA TTCTTTACGA CGCCAATAAG CCTGGCGAAA TGGAGCGCGC CGAGGCGTTC GGCGCCGACA TCCTGCGCTG TTGCGTCGAG CTCGGCGGCG TTCTGACCGG CGAGCATGGC GTCGGCATCG AGAAGCGCGA CCTGATGCCG GACATGTTCA CCGAGATCGA CCTGAACCAG CAACAGCGCG TGAAATGCGC CTTCGACAGC CAGGGCCTGC TCAATCCCGG CAAGGTCTTC CCCACGCTGC ATCGCTGCGC CGAGCTCGGG CGCATGCACG TTCATGGCGG CCGGCTCGCC TTTCCCGACC TGCCCAGGTT CTGA
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Protein sequence | MAIMMPEADQ AVLARRDQIV AALRAIVPGE GVIDSAAEML PYESDGLMAY RQPPMVVVLP ETTAQVAKVL KYCHEQGIKV VPRGSGTSLS GGALPLADGV LLGLGKFKRI REIDFDNRVV VTEPGVTNLA ISQAVAHAGF YYAPDPSSQI ACSIGGNVAE NSGGVHCLKY GMTTNNVLGC EIVLINGEVL RIGGKCAENA GYDLMGLITG SEGLLGVVTE VTVRILQKPE TARALMVGFS EVEAAGECVA RIIGAGIIPG GMEMMDKPAI HAAEAFVHAG YPLDVEALLI IELDGPGVEV DELIGRVEAI ANGCGSTTCR ISTSEAERNL FWAGRKAAFP AVGRISPDYL CMDGTIPRGA LPKALARIRE LSEKYQLGCA NVFHAGDGNL HPLILYDANK PGEMERAEAF GADILRCCVE LGGVLTGEHG VGIEKRDLMP DMFTEIDLNQ QQRVKCAFDS QGLLNPGKVF PTLHRCAELG RMHVHGGRLA FPDLPRF
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