Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1647 |
Symbol | |
ID | 5154202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 1723517 |
End bp | 1724377 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640556605 |
Product | D-amino acid aminotransferase |
Protein accession | YP_001237763 |
Protein GI | 148253178 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAGCCCA TCGCTTACGT CAACGGCGCC TTCGTGCCCC TGTCCGAGGC CAAGGTCTCG ATCCTCGATC GCGGCTTCCT GTTTGCCGAC GGCATCTATG AGGTGGCGGC GGTGCTCGAC GGCAAGCTCG TCGACAGCGC ATCGCATCTC GCCCGTCTGG AGCGCTCGGT CGGCGAGATC GGGCTGGCAT TGCCCGAGAG CCTCGCGCGC ATCGAGGAAC TGCAAAAGGA GCTGGTTGCG CGCAACCAGC TCGACCAGGG CATGGTCTAT CTGCAGGTCA CGCGCGGCGC CGACAAGGGC CGCGACTTCC CGTTTCCGAA GGGCGACGTC AGGCCGACCT TGGTGATGTT CGTGACGGCC AAGACCATCG TCGATGCGCC CTCGGCGAAA GCGGGCATCG CCGTCATCAC CGTGCCTGAC ATCCGCTGGG AGCGGCGCGA CATCAAGAGC GTGGCGCTGC TGGCGCAGGT CTTGGCCAAG CAGGCGGCTG CCGCCGCCGG CGCGAGCGAG GCTTGGATGG TCGAGGACGG TCACGTCACC GAGGGCGGCT CGTCCACGGC CTTCATCCTG ACCCGGGATG ACGTGATCGT GACGCGGCCG AACTCGAACG CCATCCTGCC GGGCTGTACC CGCAAGGCGG TGGTGAAGCT CGCCGAGGAG CGCCAGCTCA AGGTCGAGGA GCGGCTGTTC ACGGTCGCGG AAGCGCTCGC GGCCAAGGAG GCCTTCATCA CCAGCGCGAG CTCGTTCGTG CAGCCGGTGG TCTCGATCGA CGGCAAGCCG GTCGGCGACG GCAAGGTCGG GCCCGTCGCG ACGCGGCTGC GCGAGATCTA TGTCGATTTT GCCCGGGCGA CGGCGGTGTA G
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Protein sequence | MEPIAYVNGA FVPLSEAKVS ILDRGFLFAD GIYEVAAVLD GKLVDSASHL ARLERSVGEI GLALPESLAR IEELQKELVA RNQLDQGMVY LQVTRGADKG RDFPFPKGDV RPTLVMFVTA KTIVDAPSAK AGIAVITVPD IRWERRDIKS VALLAQVLAK QAAAAAGASE AWMVEDGHVT EGGSSTAFIL TRDDVIVTRP NSNAILPGCT RKAVVKLAEE RQLKVEERLF TVAEALAAKE AFITSASSFV QPVVSIDGKP VGDGKVGPVA TRLREIYVDF ARATAV
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