Gene BBta_1647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1647 
Symbol 
ID5154202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1723517 
End bp1724377 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content68% 
IMG OID640556605 
ProductD-amino acid aminotransferase 
Protein accessionYP_001237763 
Protein GI148253178 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01121] D-amino acid aminotransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGCCCA TCGCTTACGT CAACGGCGCC TTCGTGCCCC TGTCCGAGGC CAAGGTCTCG 
ATCCTCGATC GCGGCTTCCT GTTTGCCGAC GGCATCTATG AGGTGGCGGC GGTGCTCGAC
GGCAAGCTCG TCGACAGCGC ATCGCATCTC GCCCGTCTGG AGCGCTCGGT CGGCGAGATC
GGGCTGGCAT TGCCCGAGAG CCTCGCGCGC ATCGAGGAAC TGCAAAAGGA GCTGGTTGCG
CGCAACCAGC TCGACCAGGG CATGGTCTAT CTGCAGGTCA CGCGCGGCGC CGACAAGGGC
CGCGACTTCC CGTTTCCGAA GGGCGACGTC AGGCCGACCT TGGTGATGTT CGTGACGGCC
AAGACCATCG TCGATGCGCC CTCGGCGAAA GCGGGCATCG CCGTCATCAC CGTGCCTGAC
ATCCGCTGGG AGCGGCGCGA CATCAAGAGC GTGGCGCTGC TGGCGCAGGT CTTGGCCAAG
CAGGCGGCTG CCGCCGCCGG CGCGAGCGAG GCTTGGATGG TCGAGGACGG TCACGTCACC
GAGGGCGGCT CGTCCACGGC CTTCATCCTG ACCCGGGATG ACGTGATCGT GACGCGGCCG
AACTCGAACG CCATCCTGCC GGGCTGTACC CGCAAGGCGG TGGTGAAGCT CGCCGAGGAG
CGCCAGCTCA AGGTCGAGGA GCGGCTGTTC ACGGTCGCGG AAGCGCTCGC GGCCAAGGAG
GCCTTCATCA CCAGCGCGAG CTCGTTCGTG CAGCCGGTGG TCTCGATCGA CGGCAAGCCG
GTCGGCGACG GCAAGGTCGG GCCCGTCGCG ACGCGGCTGC GCGAGATCTA TGTCGATTTT
GCCCGGGCGA CGGCGGTGTA G
 
Protein sequence
MEPIAYVNGA FVPLSEAKVS ILDRGFLFAD GIYEVAAVLD GKLVDSASHL ARLERSVGEI 
GLALPESLAR IEELQKELVA RNQLDQGMVY LQVTRGADKG RDFPFPKGDV RPTLVMFVTA
KTIVDAPSAK AGIAVITVPD IRWERRDIKS VALLAQVLAK QAAAAAGASE AWMVEDGHVT
EGGSSTAFIL TRDDVIVTRP NSNAILPGCT RKAVVKLAEE RQLKVEERLF TVAEALAAKE
AFITSASSFV QPVVSIDGKP VGDGKVGPVA TRLREIYVDF ARATAV