| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1646 |
|---|
| Symbol | |
|---|
| ID | 5155822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 1722011 |
|---|
| End bp | 1723393 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640556604 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001237762 |
|---|
| Protein GI | 148253177 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGGA TTGATGCAAT TGCCCGAGCC CGTCAGGCCC TGACGAGCGG TGACTTTCTG
GCCGAGCTTG GCCGCCGGGT CGCGTATCGG ACCGAAAGCC TCAATCCCGA TCGCAAGGCC
GAACTCGCGG CCTATCTGAC CGACGAGCTG ACGCCGTCCT TCACCGCACT CGGTTTCACC
TCCGAACTCG TGCCCTCACC GAGCGGCCGC GCGCCGTTCC TGATTGCGAC CTATCACGAG
AGCGACAGCG CGCCCACCGT GCTGAGCTAT GGCCATGGCG ACACCGTCGA TGGCATGGCC
GACGAATGGC GCGACGGGCG CGATCCATGG GCGGTGACGC CCGCGGGCAA CCGCCTCTAT
GGCCGCGGCA CCGCCGACAA CAAGGGCCAG CACAGCATCA ACATGGCGGC GCTGCGCGCG
GTGCGCGAGG CCCGCGGCGG CAAGCTCGGC TTCAATGCGA AGTTCATCAT CGAGATGGGC
GAGGAGATCG GTTCGCCCGA TCTCGCCAAG GTGGCCGACC TGCATCGCGA CGCCTTGAAG
GCCGACGTCT TCATCGGCTC GGACGGCCCG CGGCTGTCGA CGTCGCGCCC CACCATCTTT
CTCGGTTGCC GCGGCGGCAT CCGGCTGCAT CTCGACGTCA ATCTGCGCGA GGGCGGCAAT
CACTCCGGCA ATTGGGGCGG GGTGCTCGCC AATCCCGCCA CCATCCTCGC CAATGCGATT
GCGACGCTGG TTGACGGCCA TGGCCGCATC AAGCTCGACT CGCTGAAGCC GCCGCGCCTC
ACCAATGCGA TCCGCGCCAT CCTCGCCGAC GTGAAGGTCG AGCCGACCGC CGACGAGCCG
GCGCTGTCGG ACAATTGGGG CGAGGAGGGC CTCTCCCCCG CGGAGCGGCT GTACGCCTGG
AACACGCTCG AGGTGCTGGC GATCTCCTCG GGCAATATCG ACAAGCCGGC GAATGCGATT
CCCGGCCGCG CGAGCGCCGT GCTGCAACTG CGCTTCGTGG TCGGCACCAA GGTCGACAGC
ATCGTCGACG ATGTGAAGAC CCATCTCGCC GCGCACGGCT TCCCGATGAT CGAGGTCAGC
AAGGCGCAGG GCTTCATGGC CTCGCGCGCC GACATCGACA GCCCCTGGAT CACATGGGCC
GCCGATTCGA TTCGCATGAG CACCGGCAAG GCGCCCGCGG TGCTGCCGAA CTTCGGCGGA
TCGTTGCCCA ACGACGTGTT TGCCGACGTG CTGAAGATGC CGACGATGTG GGTGCCGCAC
TCTTATCCCG GCTGCTCGCA GCATGCGCCG GACGAGCATA TCCTGCTGGA TGTGACGGAA
GAGGCGCTCG GGCTGATGGC CGGACTGTTC TGGGATCTCG GCGAGTTGCG GAAGCCGTTG
TGA
|
|---|
| Protein sequence | MTRIDAIARA RQALTSGDFL AELGRRVAYR TESLNPDRKA ELAAYLTDEL TPSFTALGFT
SELVPSPSGR APFLIATYHE SDSAPTVLSY GHGDTVDGMA DEWRDGRDPW AVTPAGNRLY
GRGTADNKGQ HSINMAALRA VREARGGKLG FNAKFIIEMG EEIGSPDLAK VADLHRDALK
ADVFIGSDGP RLSTSRPTIF LGCRGGIRLH LDVNLREGGN HSGNWGGVLA NPATILANAI
ATLVDGHGRI KLDSLKPPRL TNAIRAILAD VKVEPTADEP ALSDNWGEEG LSPAERLYAW
NTLEVLAISS GNIDKPANAI PGRASAVLQL RFVVGTKVDS IVDDVKTHLA AHGFPMIEVS
KAQGFMASRA DIDSPWITWA ADSIRMSTGK APAVLPNFGG SLPNDVFADV LKMPTMWVPH
SYPGCSQHAP DEHILLDVTE EALGLMAGLF WDLGELRKPL
|
|---|
| |