Gene BBta_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1613 
Symbol 
ID5153669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1687176 
End bp1688273 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content67% 
IMG OID640556575 
Productsperimidine/putrescine ABC transporter ATP-binding protein 
Protein accessionYP_001237733 
Protein GI148253148 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCC CCTTCATCTC GTTCCGACAG GTGGTCAAGC GCTTCGCGGC GCTGACCGTG 
GTCGACCATC TCGATCTCGA CATCGCGCGC GGCGAGTTCA TCGCTTTGCT CGGCCCCTCC
GGTTCGGGCA AGACGACGCT GCTGATGATG TTGGCCGGCT TCGAGCAGCC GACCAGCGGC
ACCATCGCAG TCGATGGCCG CCGCGTCGAC GGGCTGCCGC CGCACAAGCG CGACATGGGC
GTGGTGTTCC AGAACTACGC GCTGTTCCCG CATATGAGCG TCCGCGACAA CATCGCCTTT
CCGCTGAAGA TGCGGAACAC GCCCAAATCC GAGATCGCGA CGCGCGTCGC GCGCGTGCTC
GACATGGTCA AGCTCTCGGC CATGGCCGAG CGCAAGCCGG CGCAATTGTC CGGCGGCCAG
CAGCAGCGCG TCGCCTTGGC CCGCGCGCTG GTGTTCGAGC CGCAGGTCGT GCTGATGGAC
GAGCCGCTTG GCGCGCTCGA CAAGAAGCTG CGCGAGCAGA TGCAGCTCGA CATCCGCGAC
CTGCATCGCC GGCTCGGCCT CACCATCGTG TTCGTCACCC ACGACCAGGA CGAGGCGCTG
ACGATGTCCG ACCGCATCGC CGTGTTCAAC CACGGCAGGA TCGAGCAGAT CGGGCCGCCG
CGCGAGATCT ACGCATGGCC GCGCTCGCCC TTCGTCGCCG AGTTCATCGG CGAGACCAAT
CTGCTGGCGT GCAAGGTCGA CGCCCAGGCC GGCGAGGCGA TGCATCTGAT CACGGATTCA
GGCCTCGCAT TGTTGGCGCA TGCCGGCGCG GGCCGCATCG CAGGCGACAA GGTGCGGGTC
TCGATCCGCC CCGAGGCGAT CCGGATCAAC GATCACGCGG CTGCGACGGC GAACCGCCTG
ACCGCGCGCA TCATAGATGC CGTGTATTTC GGCGATCACA TGCGCCTCGT CGCGACCGTC
GGCGCGCAGC GCATGATCAT CAAGGGCGAC CGCATGAGCG GTGCGGCGGA GGTCGGCAGC
GAGGTTGCAT TGTCCTTTGC GGCGTCGGAT GTCTGGGTGG TGGGATCATG CAACGACCAG
CCCTCCGCCA GCGCCTGA
 
Protein sequence
MDTPFISFRQ VVKRFAALTV VDHLDLDIAR GEFIALLGPS GSGKTTLLMM LAGFEQPTSG 
TIAVDGRRVD GLPPHKRDMG VVFQNYALFP HMSVRDNIAF PLKMRNTPKS EIATRVARVL
DMVKLSAMAE RKPAQLSGGQ QQRVALARAL VFEPQVVLMD EPLGALDKKL REQMQLDIRD
LHRRLGLTIV FVTHDQDEAL TMSDRIAVFN HGRIEQIGPP REIYAWPRSP FVAEFIGETN
LLACKVDAQA GEAMHLITDS GLALLAHAGA GRIAGDKVRV SIRPEAIRIN DHAAATANRL
TARIIDAVYF GDHMRLVATV GAQRMIIKGD RMSGAAEVGS EVALSFAASD VWVVGSCNDQ
PSASA