| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1612 |
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| Symbol | |
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| ID | 5153608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 1686028 |
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| End bp | 1687206 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640556574 |
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| Product | spermidine/putrescine ABC transporter permease |
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| Protein accession | YP_001237732 |
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| Protein GI | 148253147 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGAC CAGCCCTCCG CCAGCGCCTG ACGGCGGTCC TGCTGCTGGC GCCGCTGCTG
GCGTTCATGC TGTCGTTCTT CGTCGCGCCC TTGGTGACGA TGATGAAATC GGCGGTGTCG
GATCCGGTGG CGACCGAGGC GCTGCCGCGC ACCGCCGCGG CGCTGGCCGG CTGGGACCGC
GCGAACGTGC CGCCCGCACC GGCGCAGTCC GCCTTCGCCG CGGACATCCG CGCACTGCGC
AACGACGAGC AGTTCGGCGA TCTCGTGCGC CGCCTGAACA GCACGCAATC CGGCTTCCGC
AGCCTGCTCG GCAAGACGCG CCGCGCGCTC GATGGCACTG GCGCTGTCGA TCTCGCCGCG
ATCGACCCGC GCTGGAGCGA GACCTCCTGG TGGGCGACCA TCGCCGACGC CGTCGCCTCG
CCCTGGACCG ACAAGAACCT GCTCGCCGCC GTCGACCTTG AGCGCAATAC CGCGGGCAAC
ATTGCAGCGA TGCCGGAGGG CGCCTCGGCC AACCGCCTGA TCATGATCCG GACCTTTGTG
ACCGCGGCGC TGGTGACCTT GGCCTGCATC CTGATCGGCC TGCCCTACGC GATGGTCGCC
GCCTCCGTCG AAGGCTGGCG CCGGCAGATT CTGCTCGGCG CGGTGCTGCT GCCGCTCTGG
ACGTCGCTGC TGGTGCGAAC CGCCGCCTGG TACATCGTGC TGCAGGACAA TGGCCTGATC
AACGCGGCGC TGAAGGGGCT CGGCCTGACA TCCACGCCGA TCCCGCTGAT GTTCAACCGG
CTCGGCGTGA TCATCGCGAT GACGCATGTG CTGCTGCCGT TCATGGTGCT GCCGATCTTC
AGCGTGCTGA TCGCGATCCC ACGCAATCTG ATGCCGGCCG CGGCCTCGCT CGGCGCGCAC
CCCCTGCGCG CCTTCCTCCA CGTGCTGCTG CCGCTGTCGA TGCGCGGTGT CGTCTCCGGC
GCGCTGCTCG TGTTCATGGC CGCGCTCGGC TACTACATCA CGCCGGCGCT GATCGGCGGC
GCCAACGACC AGATGATCAG CTCCGTCATC GCCTATTACG CGACGGCGGC GGCAAACTGG
GGCATGGCTG GTGCACTCGG CCTGGTGCTG CTCGCCATGA CCATCCTGCT CTATGCCGTC
TACATCCGGC TGACCGCGGC CGAGGAGCGC AGCGCATGA
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| Protein sequence | MQRPALRQRL TAVLLLAPLL AFMLSFFVAP LVTMMKSAVS DPVATEALPR TAAALAGWDR
ANVPPAPAQS AFAADIRALR NDEQFGDLVR RLNSTQSGFR SLLGKTRRAL DGTGAVDLAA
IDPRWSETSW WATIADAVAS PWTDKNLLAA VDLERNTAGN IAAMPEGASA NRLIMIRTFV
TAALVTLACI LIGLPYAMVA ASVEGWRRQI LLGAVLLPLW TSLLVRTAAW YIVLQDNGLI
NAALKGLGLT STPIPLMFNR LGVIIAMTHV LLPFMVLPIF SVLIAIPRNL MPAAASLGAH
PLRAFLHVLL PLSMRGVVSG ALLVFMAALG YYITPALIGG ANDQMISSVI AYYATAAANW
GMAGALGLVL LAMTILLYAV YIRLTAAEER SA
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