Gene BBta_1557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1557 
Symbol 
ID5152214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1642360 
End bp1643058 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content62% 
IMG OID640556521 
Productputative MgtC-magnesium transport family protein 
Protein accessionYP_001237679 
Protein GI148253094 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0695267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCGA TTGAGGAGAC ATTTATCAAT CTGGCGGTTG CAATGCTCCT CGGGGCCGGT 
ATCGGTTTCG AGCGCCAGTG GCGGCAGCGA ATGGCCGGGC TTCGTACCAA TACTTTGGTG
GCGATTGGAG CCGCCAGTTT TGTGGTTTTT GCGAGCCTGA TCCCGGGAGA CGGGAGCCCC
ACTCGTGTCG CGGCGCAAGT TGTTTCCGGG ATCGGCTTTC TCGGCGCCGG CATCATCTTT
CGGGAGGGTA TGCAGGTCAC CGGACTGAAC ACCGCGGCCA CTCTCTGGTG CTCGGCGGCG
ATCGGACTGT TGGCGGGCTC CGGTCATCCG TTGCATGCGA GCGTTGCCGC AGCGTTCGTC
ATTCTGGTCA ACCTGCTGCT ACGGCCGATC GTACGCCTGA TCAATCGTCA GCCAATCGCG
CAGGCGGAAA CCGACTTTCG TTACCGAGTC AGGATCGTCT GCCGGAGCCC TGAAGAAGCC
CATGTTCGTG CCCTGCTTCT CCAGGGAGCG GCTACGGGCC AACTCAGCTT GCGCAACCTC
GAAAGCACGG ACATCGAGGG CAACGACCGG GTCGAGGTGC ATGCTCACCT GACCGCCCAT
GCGCCAAGCG ATACGGTTCT GGAGCAGGTG ATTGGGCGGC TCAGCCTCGA GCCCACAGTT
TCGGCCGCGG GCTGGAGCGT TGAGCCGCTC GCCGAATAA
 
Protein sequence
MASIEETFIN LAVAMLLGAG IGFERQWRQR MAGLRTNTLV AIGAASFVVF ASLIPGDGSP 
TRVAAQVVSG IGFLGAGIIF REGMQVTGLN TAATLWCSAA IGLLAGSGHP LHASVAAAFV
ILVNLLLRPI VRLINRQPIA QAETDFRYRV RIVCRSPEEA HVRALLLQGA ATGQLSLRNL
ESTDIEGNDR VEVHAHLTAH APSDTVLEQV IGRLSLEPTV SAAGWSVEPL AE