| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1550 |
|---|
| Symbol | |
|---|
| ID | 5152845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 1631993 |
|---|
| End bp | 1633588 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640556514 |
|---|
| Product | ATP-binding region, ATPase-like protein |
|---|
| Protein accession | YP_001237672 |
|---|
| Protein GI | 148253087 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.221639 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.141787 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCGC GTTCGCTGAA ATCTGTTCTG TCATTGGTAT TCCTGTTCTT CTTTCTGCTG
ATCGTCGCCT TGGGCTTGTT CAGCATCGAG CGGCTGCGGG AGTTCAACGG GATCTCGGCG
GACGTGCGTG ACATCTGGCT GCCGAGCACC CGATTCGTCG GGGATCTCAA CAACTTTACC
TCGGACTTCC GGGCCGCCGA GGGGCGCTAT CTACTCTCTC CAAGGCAGGA GTCGGGGCCT
GGCAGGAAGG AGATCGAAGG CCTCGGAAAA GCGGTGACGC AGGCGCAAAC AGGCTACGAA
AGCCTCCGCC AGGCGCCGTC TGCCGCCGCG CTCTACGCCA AGTTCAAGGA GAATTGGACC
GTCTACCGCG AAGTGGTGGG CCGCGTCCTG CAGCTGCATG AAGCGGGCCG TACTTCGGAG
GCCGTCAACC TCTACCGCAC CACCTCGCAA TCGGCCTATG ACGCGAGCAG CGACGCGCTG
GACGGTATTA CGCGCCTCAA TATTGAGAGT GCAATTGCCG CAAGCAATGC GGCGGATACT
GCTTACCGGC ATTCAAGGGC CCTGATCATC CTCGCCATGA GTATTGCAGT AGTGTTGGTC
ATGGGAGCGC TTTTCTATGT GAAGCGCTTT ATCTCGACGC CCTTGCTCGA GCTTGCGGCC
GGCATGCGAA AGCTTGCGCG AAACGACGCC GACATTGAGA TACGCGGTGC CGACCGCATC
GATGAAATCG GCGAAATGGC CCGCGCGCTA AGTGTCTTCC GCACGAACGC TATTGAGTTA
ATGCTCAGTC AACGCTCGTT GTCACAACAG GCGAGCATGC TGGAAGAGAG GCTCGCGGAG
GAGCAGCGGT TAAGCCAGCT GCGGCAGGAT TTCGTATCGA TGGCCTCGCA CGAATTCCGC
ACGCCGCTAA CCGTAATCGA CGGGCAGGCG CAGCGTCTTG CCAAAACGAG CAAAGATGCC
ACGAGCGCTG ACATCGTCGA GCGCGCGGGA AAGATCCGCA AAGCGGTGTT CCGTATGACT
ACGGTAATCG ACAAACTCCT CAATTTCTCG AGTCTGGTTG AAGGTAAGGC GGAACTCTAT
TTTCACCCCG CTGAAACCGA TCTGCGGGGA GTCTTGGAAG AGGTTTGTAA CGTCCATCGT
GAGGTCGCTC CGCAGGCGAA CATATCGCAA AGGCTGGGCA CTTCGCCGTT GCCTGTGTTC
GGCGACGTCA AATTGCTGTT TCAGATGTTC GGCAATCTCA TATCAAACGC TCTCAAATAT
TCTCCCGACG GCAGTTCTAT TGAGGTCATC GCAGCGACGG AGGGAGATAA GATTGCGGTT
TCTGTCCGCG ATCGCGGGAT GGGTATTCCT CAAAGGGACC TCGCGAACAT CTTTGATCGC
TACACCCGCG GCAGCAATGC TTCAGGGATC GTGGGCACTG GTGTAGGTTT ATACCTGGTC
AAGATTGTTG CCGAACTGCA TAACGGCAGC GTTGTTGTAG ACAGCATCGA GGACGAAGGA
TCCTGCTTCA CGGTTCGCCT GCCTTCGTTG CGTGTAGATA ACCATCCGAA CTCTCCTGAA
GCGAACCTTC GGCCGGCAAC ATTGGGCGAT AGGTAG
|
|---|
| Protein sequence | MRARSLKSVL SLVFLFFFLL IVALGLFSIE RLREFNGISA DVRDIWLPST RFVGDLNNFT
SDFRAAEGRY LLSPRQESGP GRKEIEGLGK AVTQAQTGYE SLRQAPSAAA LYAKFKENWT
VYREVVGRVL QLHEAGRTSE AVNLYRTTSQ SAYDASSDAL DGITRLNIES AIAASNAADT
AYRHSRALII LAMSIAVVLV MGALFYVKRF ISTPLLELAA GMRKLARNDA DIEIRGADRI
DEIGEMARAL SVFRTNAIEL MLSQRSLSQQ ASMLEERLAE EQRLSQLRQD FVSMASHEFR
TPLTVIDGQA QRLAKTSKDA TSADIVERAG KIRKAVFRMT TVIDKLLNFS SLVEGKAELY
FHPAETDLRG VLEEVCNVHR EVAPQANISQ RLGTSPLPVF GDVKLLFQMF GNLISNALKY
SPDGSSIEVI AATEGDKIAV SVRDRGMGIP QRDLANIFDR YTRGSNASGI VGTGVGLYLV
KIVAELHNGS VVVDSIEDEG SCFTVRLPSL RVDNHPNSPE ANLRPATLGD R
|
|---|
| |