| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1545 |
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| Symbol | |
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| ID | 5152561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1625585 |
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| End bp | 1626832 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640556509 |
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| Product | HlyD family heavy metal efflux pump |
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| Protein accession | YP_001237667 |
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| Protein GI | 148253082 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.453732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.148664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGCAT TGATGGCAGT GGTCCAATCC AGAGTGATCG TCGTTGTTGC GGGTGGCGCG
CTGTGCTTCC TGGCTGGAGC AGCCTCAGTC AGCTACGTCA ACGGCTGGTT GCAGTCGAGC
GCCCAGATCG TGAGCCCGAG CGCAAACGCT AAGACGGATT CTCCTGAAGC CAAAATGGGC
GTCGTCGGCG GCATGCCGAG CATCGAACTT AATGAGAAGC AAATGCTGAC CGTCAAGGTC
GAGGCGGTCA AGGACCAGGA GTTCCCGCTC GAGAAGGCGG CGGTCGGCAG CATCGATTTC
AACGAAGAAA TGACCCTTCA GGTCTTCACG CCGTACCAGG GGCGCATCCT GGAGACGTTC
GCCAAGGTCG GCGACGAGGT CAAAAAGGGG CAAGTCCTCT TCACAATCGA TAGTCCGGAT
TTGCTTTCAG CCGCGTCAAG CCTGATCGCA ACTTCCGGCG TGCTGCAGCT GACGACGCGG
GCATTGAACA GGCTCAAGAC GCTCTATGAA AGCCGGGCGG TCGCCCAGAA GGATGTTGAG
CAGGCAATCT CGGATCAGCA GACCGCTGAA GGCGCGCACA AAGCTGCGCG TGATGCTGTC
CGTATTTTCG GCAAGACTGA CGCCGAAATT GACGCAATCA TCAAGGAGCG CCGGGCCGAT
TCAACGCTCG TGGTGAAAAG CCCGATCAAC GGTCGCATCA CCGCGCGCAA CGCCGCTCCC
GGGTTGTTCG TCCAACCTGG CAGCGCGCCG GCGCCGTTCT CGGTTGCGGA CACCTCGACC
ATGTGGATGA TCGCCAACGT CGCTGAAAGC GACGTTTCGG CCATCCACGT CGGCCAGCAC
GTCAAGGTCT CTGTGATGTC GTATCCCGGC AAGATCTTCG AGGGGCACAT TTCAACGATC
AGTTCGAACG TCGATCCCAA CACGCACCGG ATGCTGGTCC GCTCCGAGAT CGAGGACCCT
GATCACGAAT TGCGCTCCGG CATGTTCGCG CGCTTCTCGA TCGTGATCGG CGCTCCCGTC
AGATCACCTG CCGTGCCGCT CGACGGGGTG GTGCGCCAGG GCGATGGCAC CATGACGGTA
TGGGTCACGA TCGACAGGAA GCGTTTCACT CAACGCGTCG TCAAGATCGG CGACCAGAAG
GACGGGCTGC GGCAGATCAT GGAAGGGCTG CAGCCGGATG AACTCGTTGC CACCGAAGGC
GCGCTGTTTC TGAGCAACAT GCTGGCTATC GGCCAGGCAG GCGGCTGA
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| Protein sequence | MGALMAVVQS RVIVVVAGGA LCFLAGAASV SYVNGWLQSS AQIVSPSANA KTDSPEAKMG
VVGGMPSIEL NEKQMLTVKV EAVKDQEFPL EKAAVGSIDF NEEMTLQVFT PYQGRILETF
AKVGDEVKKG QVLFTIDSPD LLSAASSLIA TSGVLQLTTR ALNRLKTLYE SRAVAQKDVE
QAISDQQTAE GAHKAARDAV RIFGKTDAEI DAIIKERRAD STLVVKSPIN GRITARNAAP
GLFVQPGSAP APFSVADTST MWMIANVAES DVSAIHVGQH VKVSVMSYPG KIFEGHISTI
SSNVDPNTHR MLVRSEIEDP DHELRSGMFA RFSIVIGAPV RSPAVPLDGV VRQGDGTMTV
WVTIDRKRFT QRVVKIGDQK DGLRQIMEGL QPDELVATEG ALFLSNMLAI GQAGG
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