Gene BBta_1525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1525 
Symbol 
ID5152488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1610646 
End bp1611170 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content59% 
IMG OID640556490 
Producthypothetical protein 
Protein accessionYP_001237648 
Protein GI148253063 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.815078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGCGC GTCTCGGCTT GTCGAGTAGA CGAGGAGCAT TTATGACCCC GACCAAGACG 
AGATTTGGAA AACTGTCCGG ACGCCGGAGT GAATCGGGCA CGGCGGCCAT CGAGTTCGCG
CTGTTTATCC CATTCCTGTT CATTCTACTG GTGGGGACGG TCGATCTCGG GTTCGCCATG
TATGAGGCAA TGCAGGTGAG CAATGCGGTC GAAGCAGGCA TGCTATATGC GGCCAAGAAC
GGTTGGGATT CCGCGGGCAT TACCAATTCG GTACTCAATG CGAGCAGCGT CTATCCGGGC
GGCACGCCGG CCCTGACAGC CACTCCGGCT CCATCGCAGT TTTGCGGCTG TCCACAAGCA
ACCGGCATCG CGGTGGCGAC ATGCAGTTCG ACTTGCCCCG ACGGGAGCGC TGTGAGCCAA
TATGTTCAGG TCAACGCGGC GCTCAATCAC CTGAGCATTT TGTCCCTTCC CGGTCTGCCG
GTGCCGAGCA CATTTACCGC GAAAGCGGTG GTCAGGGTGA ACTAG
 
Protein sequence
MAARLGLSSR RGAFMTPTKT RFGKLSGRRS ESGTAAIEFA LFIPFLFILL VGTVDLGFAM 
YEAMQVSNAV EAGMLYAAKN GWDSAGITNS VLNASSVYPG GTPALTATPA PSQFCGCPQA
TGIAVATCSS TCPDGSAVSQ YVQVNAALNH LSILSLPGLP VPSTFTAKAV VRVN