Gene BBta_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1523 
Symbol 
ID5152487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1610223 
End bp1610642 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content60% 
IMG OID640556489 
Producthypothetical protein 
Protein accessionYP_001237647 
Protein GI148253062 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.803831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCAA TCCTGAAATC GCGAACTCGG CCTCGTCGGA GCGGCGCAGT CGCCATTGAA 
TATGGCTTCG TCCTGCCGGT GCTGTTGCTG TTCATCTTCG GAATCATCGA CATCGGCCGC
CTGCTATGGA CATTTACGAC CTTGAGCCGG GCGACCGAAG CCGCCGCGCG ATGCGCCGCC
GTCAATAGCA CGGCGTGCGC CAACGCGGGC CTGATCCAAA ATTATGCCGT AGGCGAGGCA
TGGGGGCTTG ATGTCACGGC TGCGGCCTTC ACGGTCACGC AACCTGCCTG CGGCAAGCAG
GTGAGCGCAA CCTATACGTT CCAGTTTGTC ATCCCGTGGT TTTATGGGAC TTCAACGTTT
GGCAGCGCCA ACACCATGAC GTTGAGCACG ACGGCATGCT ATCCGCCGCA ATATCCGTAG
 
Protein sequence
MAPILKSRTR PRRSGAVAIE YGFVLPVLLL FIFGIIDIGR LLWTFTTLSR ATEAAARCAA 
VNSTACANAG LIQNYAVGEA WGLDVTAAAF TVTQPACGKQ VSATYTFQFV IPWFYGTSTF
GSANTMTLST TACYPPQYP