Gene BBta_1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1521 
Symbol 
ID5152756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1608726 
End bp1609088 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content53% 
IMG OID640556487 
Producthypothetical protein 
Protein accessionYP_001237645 
Protein GI148253060 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5010] Flp pilus assembly protein TadD, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.689528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.747581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGCGAGG AATATTTCAA TCGCGGGATT TACGGAACAG CCGAGAAGTA TTTCCAGAGT 
GCGGTCGAAA AGGCTCCGAA GGACGTGAGT GCATGGATCG GACTTGCCGC TAGCTATGAC
CGCCTTGGGC GTTTCGATCT GGCGGACCAC GCGTATGGCC AAGCCATCAA GCTGGGTGGA
GAAACCACGC AAATTCTCAA TAACCTTGGT TACTCCTACA TGCTGCGCGG AAAACTGACC
GCCGCTCGGA CGAAATTCAT GGAAGCTTAC CGGCGTGAAC CTGATAACCC GACGGTTCTC
AACAACATCA ATCTGCTGAA TTCAAGCTAT CGATTCATTG AGCGCGAGCT GCCTCCGCAG
TAG
 
Protein sequence
MGEEYFNRGI YGTAEKYFQS AVEKAPKDVS AWIGLAASYD RLGRFDLADH AYGQAIKLGG 
ETTQILNNLG YSYMLRGKLT AARTKFMEAY RREPDNPTVL NNINLLNSSY RFIERELPPQ