| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1519 |
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| Symbol | |
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| ID | 5152754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1606415 |
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| End bp | 1607905 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640556485 |
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| Product | putative pilus assembly protein cpaC |
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| Protein accession | YP_001237643 |
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| Protein GI | 148253058 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.527914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.565497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTACA CGTGGGCAGC CGTGGCTTTG ATGGCTGCGA CCATCAGCAT CGGGATCTAC
GGCATCGGTC CGGCGAGGTC GCAGGTGCGC GTGGTTCAGG ATGACCCTGT GCCAGCGCGG
CAGATTTCGG TGACGCGCGA CAAGTCGCGC ACGATCAAAC TGGATAAGCC ATTTGCCTCG
GCGCTCGTTG GAGCTCCAGA TATTGCCGAT GTTCTGCCGA TGTCCGATCG CATAGTCTAC
ATTCAGGGAA AAAAAATCGG AACCACCAAC GTTACCCTAT TCGATCAAGA CAAGAATGTG
ATCGGCGTGA TCGGACTGGA AGTCACGATC GATATCCAGA ATATCGCTAG CAAGATTCGC
TCCGGAACGA ACAGCCCCGG CATCCGCGTC TCCAGTAGCA ACAACCAGAT TGTGTTGAGC
GGCGAGGCGA GGGATGCCGT GGATGCCGAA AAGGCAGTCG CGATCGCCAG GGGAATGGCG
ACGCCGCCGG AAGGAAAGGA TCCAGAAAAA TACGTCATCA ACGCGATGCG CGTCGCTGCG
TCGCAGCAAG TGATGTTGAG AGTTCGTTTC ATCGAAGTGA GCCGCCAGGC GGAGCGGGAA
ATCGGCGTGA ACTGGTTCGG TGCCAATGCC AGCGGAACAC GTGGCATCAA TACCGGAACG
GGCGCCATCA GCCAGGCTGG CCCCACGGCT ACGAGCGCCG GGGTTCCCGT GTTCAACACA
ATCGGAACGT TCGCTGGAAG CACCTTGAGC GCGCCCTTCG GCGTTGGGCT TTTCAATCTT
GCTAACAAGG GCGGCAGCGT CGACGTTCTT ATCACTGCGC TGGAAAAGAA AGGACTCGCA
AGGCGGCTCG CGGAGCCGGA TCTCGTCGCT CTTTCCGGCG ATACGGCGAG CTTTCTCGCG
GGCGGAGAAT ATCCCGTGCC TTCCGTGCAG TCCTCGTCGG GCACGACCCC TGTCATCACC
GTATTGTACA AGCCATTCGG CGTGCAGTTG ACGTTCGTTC CAACCGTGCT CGCTAGCGGA
ATTATCAATC TGCGCCTGAC GCCTTCGGTC AGCGAGCTCG ATTACACGAA CGCCGTTGCG
ATCTCCGGTA CTCTTGTCCC GGCGTTGAGC AAACGCGAGG CGCGGACGGC GATCGAACTG
CGCGACGGGC AGAGCTTCGC GATTGCCGGT CTTCTTCAGT CGGATAATTT GCGGGACGTC
GGACAACTGC CCTGGCTCGG TTCGGTGCCC GTTCTCGGGA CGCTGTTCCG CAGCACGTCG
TACCAGCAGA AAGAGACTGA TCTCGTGGTG ATCGTCACGC CTCATCTTGT CGCGCCAGCG
GCTCCGGGCC AGGCCCTGGC GACGCCATTT GACAAACAGC TTCCCGGCAA CGATGTCGAC
CTGTTCCTGA TGGGCCGACC GGAAGTCCGC AAGCAATATA CCGATTACCT GACATCTGGT
GGGGCGAATG TAGGGCCCTA TGGTCACATG ATGCCCCTCG AACCGAAATG A
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| Protein sequence | MGYTWAAVAL MAATISIGIY GIGPARSQVR VVQDDPVPAR QISVTRDKSR TIKLDKPFAS
ALVGAPDIAD VLPMSDRIVY IQGKKIGTTN VTLFDQDKNV IGVIGLEVTI DIQNIASKIR
SGTNSPGIRV SSSNNQIVLS GEARDAVDAE KAVAIARGMA TPPEGKDPEK YVINAMRVAA
SQQVMLRVRF IEVSRQAERE IGVNWFGANA SGTRGINTGT GAISQAGPTA TSAGVPVFNT
IGTFAGSTLS APFGVGLFNL ANKGGSVDVL ITALEKKGLA RRLAEPDLVA LSGDTASFLA
GGEYPVPSVQ SSSGTTPVIT VLYKPFGVQL TFVPTVLASG IINLRLTPSV SELDYTNAVA
ISGTLVPALS KREARTAIEL RDGQSFAIAG LLQSDNLRDV GQLPWLGSVP VLGTLFRSTS
YQQKETDLVV IVTPHLVAPA APGQALATPF DKQLPGNDVD LFLMGRPEVR KQYTDYLTSG
GANVGPYGHM MPLEPK
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