Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1515 |
Symbol | |
ID | 5152285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 1602666 |
End bp | 1603964 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640556482 |
Product | secretory protein kinase, cpaF |
Protein accession | YP_001237640 |
Protein GI | 148253055 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0638595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0739759 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCCT CGACGAGGCC GACGGTCTCC GAGGCGAAGG ACTTCATCCG CGACCAGATT TTTCTGCGTA TCGAGCCATT GGTTGCGGTG CGGATCAGCC AGCAAGACCT GATGGTCTCC GTCAATAAAT TGGTGGCCGA GATCGCGACT GGACGAAAAA TCCTCCTGAA CCAGGATGAG CAGCGCGTTC TCAGCGCCAG CATCGTCGAC GAAATGGTCG GACTCGGACC GATCGAGCCG CTCCTACGGG ATCTGTCGGT AGCCGATATC CTCGTCAACG GGCCGCGCAT GATCTATGTG GAGCGGCGGG GCAAGCTGGA GTTGACCAAG CTGCAATTTC GCAGCGATGC GCACGTTCTG CATGTGGCGC AACGCATTGC ATCGTCGATC GGCAGGCGCA TCGATGAATC AAGTCCCATG CTGGACGCAA GATTGGCGGA TGGCAGTCGT GTCAACGTGA TCATTCCGCC GCTCAGCCTC AGAGGTCCTT GTATTTCGAT CCGCAAGTTT TCCAGGTCCA TGATGGATTT CGCAAGCTTT GTCACCGGAG GTACGCTTTC GCCGGAGCTC GCAAGCGCGC TCGAGATCGC CGCGCGTTGT CGTCTGAACA TTATCATCTC CGGCGGTACC GGCTCCGGTA AAACGACCCT GCTCAACTCT CTTTCGCGCA TGATCGATCC GGGCGAGCGC ATCATCACGA TAGAAGATGC TGCCGAGCTC CAGCTTCAGC AGGCTCACGT CATTCAACTG GAGATGCGTC CGCCCAATGT CGAAGGGCGC GGCGAAATCA GCCAGCGTGA CCTGATGCGC AACGCCCTTC GAATGCGGCC GGACCGGATC ATCGTGGGGG AGGTTCGTGG AGCAGAGGCG TTTGACATGA TGCAGGCGAT GAGCACAGGG CATAACGGCT CCATGTCGAC GGTTCATGCC AACTCCGCGC GCGATGCGTT GGGACGTATC GAGAACATGA TCCTGATGGG AAGCGGCAAT TTGCCGATGC GGGCGATTCG CACCCAGATC GTCAGCGCGC TCGACCTTGT GGTGCATGCC GAGCGCATGC GCGATGGGGT TCGCCGGGTG ACCGAAGTTG CGGAGGTTGT CGGATTGGAA GGGGAGGTCA TCACCCTCGG TTCGTTGTTC ACCTACAAAT ACCAGGGCGA AAACCCGGAT GGCACCCTCC GCGGAGGTTT CGAACCGACG CAGGTCCGGC CGCAATTTCT TTCGCGGCTG GAATATTTCG GATTAGCCTC TGCGTTCTTG CGGTCGCTTG GCGTTCTGGA GAAAGCAACC GAGGAATAG
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Protein sequence | MKASTRPTVS EAKDFIRDQI FLRIEPLVAV RISQQDLMVS VNKLVAEIAT GRKILLNQDE QRVLSASIVD EMVGLGPIEP LLRDLSVADI LVNGPRMIYV ERRGKLELTK LQFRSDAHVL HVAQRIASSI GRRIDESSPM LDARLADGSR VNVIIPPLSL RGPCISIRKF SRSMMDFASF VTGGTLSPEL ASALEIAARC RLNIIISGGT GSGKTTLLNS LSRMIDPGER IITIEDAAEL QLQQAHVIQL EMRPPNVEGR GEISQRDLMR NALRMRPDRI IVGEVRGAEA FDMMQAMSTG HNGSMSTVHA NSARDALGRI ENMILMGSGN LPMRAIRTQI VSALDLVVHA ERMRDGVRRV TEVAEVVGLE GEVITLGSLF TYKYQGENPD GTLRGGFEPT QVRPQFLSRL EYFGLASAFL RSLGVLEKAT EE
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