| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1508 |
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| Symbol | |
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| ID | 5151938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1596064 |
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| End bp | 1597242 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640556475 |
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| Product | conjugal transfer protein trbI |
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| Protein accession | YP_001237633 |
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| Protein GI | 148253048 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.187408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.430522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGACA ATGGTTCAAG CGAGCGCGTC AGTCCTTCAA CTGGACCAAG ATCGGCGTCG
ACTGATCATA CGCAGGCCGT ACGATTGGCT ACAGAGCGTC CCAAGATCAC GCGGCTCTCC
CGCAAAATTC TTGCAGGCGG CAGCACGCTG GCTTTGCTGC TCGTCGCCGG CGCGGTGCTA
TGGGCCTTGG GCAACCCGCC GCACAATCCC GCACTGGGCG AACTCTACAG CACAGACCAT
CACAACGTGG CAGACGGTCT GACGAAGTTA CCGCAAGACT ATGGCGGCGT TTCACACGAG
ACCACCCGAT CTGGACCGCC GAAGCTGGGT GACCCGGCGC CCGCCAGCGC AACGGCGGCA
TCAGCAATCG GCCTTGACGC TGAACAACAA CGTGCCAACC AGGAAACCGA GGCAGCTCGG
ACCAGCAAAG TCTTTGCATC GACAACCGCG CCGCCGACGT CGCCGCATGC TGCATCTCAG
GAGACGGCCA CCAACGCCAC GGCATCATCC TCGGACGAAA CCTTCACGCA GAATGGGCAG
GATCGCAAGC AACTGTTCGT CAATGCTCCC ATCGATCGGC GGACCACGGC GCCCGACAGG
CTTCTGCGTC CTGCATCTCC ATACGTCGTT CAAGCGGGGA CCATCATTCC GGCAGCGCTC
ATGACCGGGA TTCGCTCTGA TCTCCCCGGC CAAATCACCG CACAAGTGAC AGAGGCGGTC
TATGATACTC CTTCTGGCCG TGCAAAACTT ATCCCGCAAG GCGCAAGACT CATAGGAATC
TATGATAGCC AGGTCGCATT TGGCCAGTCT CGGGTGCTGT TGGTGTGGAC GCGTCTGATC
ATGCCGGATG GTCGATCGAT CGTGCTGGAA CGGCAACAGG GAACGGATGC GGGCGGGTAT
TCCGGTCTCG AGGACGACGT CGACAATCAC TGGGCTGAGC TGTTCAAGGC GGCGCTGCTG
TCAACCACCC TTGGCGTGGG AGCGGAGCTT GGCTCTGGTG CGGATAGCGG CAGCAACACC
GATATTGTTC ACGCGCTCCG CCTGACCGGG GCGAATTCCT TGAACCAGAC TGGACAACAA
GTCGTTCGAA GGAACCTCAA TATTCAGCCA ACCCTGACAA TTCGGCCTGG CTTCCCGATA
CGAGTGATCG TCAATCGTGA CCTGGTGATT GAACCATGA
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| Protein sequence | MTDNGSSERV SPSTGPRSAS TDHTQAVRLA TERPKITRLS RKILAGGSTL ALLLVAGAVL
WALGNPPHNP ALGELYSTDH HNVADGLTKL PQDYGGVSHE TTRSGPPKLG DPAPASATAA
SAIGLDAEQQ RANQETEAAR TSKVFASTTA PPTSPHAASQ ETATNATASS SDETFTQNGQ
DRKQLFVNAP IDRRTTAPDR LLRPASPYVV QAGTIIPAAL MTGIRSDLPG QITAQVTEAV
YDTPSGRAKL IPQGARLIGI YDSQVAFGQS RVLLVWTRLI MPDGRSIVLE RQQGTDAGGY
SGLEDDVDNH WAELFKAALL STTLGVGAEL GSGADSGSNT DIVHALRLTG ANSLNQTGQQ
VVRRNLNIQP TLTIRPGFPI RVIVNRDLVI EP
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