Gene BBta_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1506 
Symbol 
ID5151936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1594404 
End bp1595087 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content62% 
IMG OID640556473 
Productconjugal transfer protein TrbF 
Protein accessionYP_001237631 
Protein GI148253046 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3701] Type IV secretory pathway, TrbF components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.50681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGC GGCCATCCGT GCACTACGGC AGCACGCCGC AGCCCGTAAC GCCCTATCAG 
AAGGCAGCAC AAGTCTGGGA TGAGCGGATT GGTTCGGCCC GGGTCCAAGC CAGGAACTGG
CGGTTGATGG CATTTGGATG CCTGTTGCTG TCCGGCGGGC TCGCCGCGGC TCTCGTCTGG
GAATCCACCC AAGGCACGAT CACTCCGTGG GTCGTGCAGG TTGATCATCT CGGCCAGGCC
CAGGCGGTTG CGCCGGCAAG TTCCTCCTAT CAGCCGACTG ATCCGCAAAT TGCGTTTCAT
CTCGCGCGGT TTATCGAGGA TGTACGGGGC TTGCCGACCG ACGCCATCGT GCTGCGGCAG
GACTGGCTCA GAGCCTACGA TTTCACGACC GATCGTGGCG CCGCCGCGTT GAACGATTAC
GCCCGAACGA ACGATCCCTT TGTCAAGCTC GGCAACACCC AGGTCGCGGT CGAGATTTCC
AGCGTCATCC GCGCCTCACC GCAAAGCTTT CGAGTGGCAT GGACCGAGCG CCGTTACGAC
AGCGGCCAGC TCGCTGCGAC CGAGCGCTGG ACCGCGATCC TTTCCGTGAT CATCGAAACC
CCGCGCGACA CCGATCGCCT GCGCAAGAAT CCGCTTGGCG TTTATGTCAA TTCCATCAAC
TGGTCGAAGG AGCTTGGCCA GTGA
 
Protein sequence
MFKRPSVHYG STPQPVTPYQ KAAQVWDERI GSARVQARNW RLMAFGCLLL SGGLAAALVW 
ESTQGTITPW VVQVDHLGQA QAVAPASSSY QPTDPQIAFH LARFIEDVRG LPTDAIVLRQ
DWLRAYDFTT DRGAAALNDY ARTNDPFVKL GNTQVAVEIS SVIRASPQSF RVAWTERRYD
SGQLAATERW TAILSVIIET PRDTDRLRKN PLGVYVNSIN WSKELGQ