Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1502 |
Symbol | trbD |
ID | 5151851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 1589377 |
End bp | 1589640 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640556469 |
Product | conjugal transfer protein trbD |
Protein accession | YP_001237627 |
Protein GI | 148253042 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5268] Type IV secretory pathway, TrbD component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGGAC AGATCCCAGG ATTTGAAGCA CCGGTCCATC GCGCGCTGAC CGAGCCGATC CTGATGGGCG GGGCGCCACG CTCGATCGCC ATCGTTAACG GCACGCTCGC TGCTGCCCTC GGTATTGGTC TGCGCCTCTG GGTCGCGGGC CTCCTGCTTT GGTTCGTTGG TCACATGGTC GCTGTCTGGG TGACCAAGCG CGACCCTGCC TTTGTCGAGG TCGTCCGCCG GCATCTCCGG ATCCCCGGTT ATCTCAACAC ATGA
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Protein sequence | MDGQIPGFEA PVHRALTEPI LMGGAPRSIA IVNGTLAAAL GIGLRLWVAG LLLWFVGHMV AVWVTKRDPA FVEVVRRHLR IPGYLNT
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