| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1492 |
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| Symbol | |
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| ID | 5151430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1579626 |
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| End bp | 1581353 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640556459 |
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| Product | hypothetical protein |
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| Protein accession | YP_001237617 |
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| Protein GI | 148253032 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0742429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.420716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGAA GCGACGATTT TCGGATCCGT CCAGGTCGCA TCCGCTCGAC GCGCGCGGCG
CGTACAAAAC CGTTCCTGGC GCAGGCGCTC CAAGCCGCGC AGAAGGCTGG CGGACTCTCG
CGGGCCGGCC AGAGACGCGG CAGTACGTTT GGGCGTGGCC GCGCCGCGAG CCTTGCCGCG
TCAAGACTCC TAGGCAGCCG TGCTCGCGGC GCTGTCATCA AGGCGCAAGT GGTCCGGCGG
ATGCGATCGC CGGGTGCGCT GCGCGCCCAT ATCGGATATC TCCAGCGCGA CGGGGTGACC
CGCGATGGGG CGCCCGGCAA ATTGTTCGAT GCCGCCGGAG ACGAGGCCGA CGGCCGAGCC
TTCACTGAGC GTTGCAAGGA CGACCGGCAT CATTTCCGGT TCATCGTCTC GCCCGATGAT
GCCGGCGAGC TCTCGAGCTT GCGGACCTTC ACCCGCGAGC TCATGGACCA GGCCTCGCGC
GACCTCGGCA CGCGGCTCGA TTGGGTCGCC ATCGACCATT GGAACACCGA GCACCCACAC
GTCCATATCC TCGTGAGAGG CCGCGCCGAT GACGGCCAAG ACCTCGTCAT CAGCCGCGAC
TATATTTCGA CGGGCTTGCG TGCCCGCGCT GGCGATCTCG TTACTCGCGA GCTCGGTCCG
CGATCGGAGC TTGAGGTCCG TCGTGGTCTT GAGAATGAGA CGACGGCCGA ACGCTGGACA
CGGATCGATC GGGTGCTTGC CCGGGAAGCG GGGGCGGCGG ATGGGGTCAT TGATGTCAGG
CCGAGCCGGG ATGTCGCGGC CGATCCGCTG CGGGAGCTTA GAATTGGTCG GATGCGGACC
CTGGAGCGGC TGGGTCTGGC TGAACCTGCG GGGCCAGCAC GCTGGGTGCT CGCGCCTGAC
GCAGAACTCC GCTTGCGGGA GCTAGGCGAG CGCGGCGATA TCATCAAGCG GCTGCACAAG
AGCCTGACGA AGGATGGTGC CACACGCGCC CCGTCATCCT GGGCGCTCGA AGGCGAACGC
CATGGCGAGC CCGTGATCGG CCGCCTCATC GCCCGCGGGC TGGATGACGA GTTGAGGGGC
TCAGCATTCG CCGTCGTCGA CGGCATCGAC GGGCGCGTTC ATCATCTCAA GCTCCCCGAT
ATTGAAGCGG CTGGGGATGG TCCAATCGGC GGGATCGTGG AGCTCCGCCA TTTCGATGAT
GCAAGGGGCC GTCAGCGGAT CGCACTCGCG GTCCGCTCGG ATCTCAGTCT CGACCAGCAG
GTGGTAGCGG AGGGGGCGAC CTGGCTCGAC CGCCGGCTGG TGGCCCGAGA AGGTGCAGAG
CTTTCGCGGG CCGGTTTCGG CGCCGAGGTT CGTGCTGCGC TCGATCGGCG GATCGATATT
TTGGCAGAGC AGGGCCTTGT CCGCCGCGAC GGAGACAAGG TCACAATCGG GCGCAACCTT
GTCGCTACGC TGCGCAGCCG CGAGCTCGAC GTGATCGGAC GGCGTCTCGC TTCGGAAACG
GGACTGTCGC ATTTGCCCGC CGAGGCAGGG GAGACAGTCA CAGGAGTTTA TCGCCAACGG
CTATCCCTTG CTTCCGGCCG CTTCGCAATG ATCGACAATG GTTTGGGATT TCAGCTTGTA
CCCTGGACAC CTTCCCTGGA ACGCGAGCTT GGCCGGCACG TCAACGGCAT CGCCGGTCCC
GGTGGCGTTG AATGGAGTCT CGGACGCAAG CGGGACCTCG CGGTCTGA
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| Protein sequence | MTRSDDFRIR PGRIRSTRAA RTKPFLAQAL QAAQKAGGLS RAGQRRGSTF GRGRAASLAA
SRLLGSRARG AVIKAQVVRR MRSPGALRAH IGYLQRDGVT RDGAPGKLFD AAGDEADGRA
FTERCKDDRH HFRFIVSPDD AGELSSLRTF TRELMDQASR DLGTRLDWVA IDHWNTEHPH
VHILVRGRAD DGQDLVISRD YISTGLRARA GDLVTRELGP RSELEVRRGL ENETTAERWT
RIDRVLAREA GAADGVIDVR PSRDVAADPL RELRIGRMRT LERLGLAEPA GPARWVLAPD
AELRLRELGE RGDIIKRLHK SLTKDGATRA PSSWALEGER HGEPVIGRLI ARGLDDELRG
SAFAVVDGID GRVHHLKLPD IEAAGDGPIG GIVELRHFDD ARGRQRIALA VRSDLSLDQQ
VVAEGATWLD RRLVAREGAE LSRAGFGAEV RAALDRRIDI LAEQGLVRRD GDKVTIGRNL
VATLRSRELD VIGRRLASET GLSHLPAEAG ETVTGVYRQR LSLASGRFAM IDNGLGFQLV
PWTPSLEREL GRHVNGIAGP GGVEWSLGRK RDLAV
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