Gene BBta_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1460 
Symbol 
ID5149292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1545823 
End bp1547751 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content64% 
IMG OID640556430 
Producthypothetical protein 
Protein accessionYP_001237588 
Protein GI148253003 
COG category[L] Replication, recombination and repair 
COG ID[COG5421] Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCCACA AAGGGCTGGA TGTTCGGATT CGGCCGAAAT CGGCTGTAGT GAAGACCTAC 
CCGATTCCCA AGGCCATGAC GGTGCGCGTA GGATTCGCCA TCATGTTCCT GCGCCGCACC
GAGCGAAAGA AGAATGGCAA GACGCACACC TACTGGAGCG TCGTCGAGAA CAAGCGTCTC
GATGGTGGAC GGGTGGTGCA GCGGCATGTG CTGTATCTCG GCGAGATCAA CTCCTCACAG
GCGGCGAGCT GGCGCAAGGC GATCGAGGTG TTCGACGAGG ACACCGGCCG CGCGCAGACG
CTGTCGCTGT TCGCGGAGGA TCGCTGCGAA GCCGTGGCTG GCGATGCGTC GATCATCCAA
CTGCGTCTGT CGCAGATGCG GCTCCACCGC CCGCGGCAAT GGGGCGCCTG CTGGTTGGCG
GGACAGCTGT GGCAGGAGCT TCAGCTCGAC CAGTTCTGGG CCGAGCGGCT GCCGCCGAGC
CGGAAGAAGA CGCGCTGGGA TCAGATCCTG CAGGTGCTCG CCACCTACCG CCTGATCGCG
CCGGGCAGCG AATGGCGGCT GCATCGGCAA TGGTTCGGCG ACAGCGCGAT GGCGGATCTG
CTGGGCGCTG ACTTCGGTCT TGTGGAGGAG CACAAGCTCT ACGCCTGTCA CGATCTGCTG
CTGGCGCACA AGGACGCGCT GTTCAGTCAC CTGGTCGGAC GCTGGCGTGA TCTGTTCAAT
GCCGACTTCG ACGTCCTGCT GTACGACCTG ACCAGTACCT ACTTCGATGT CAATGCCGCG
GACCTGCCGG AGGACGGCAA ACGCCGTCAC GGCTACAGCC GCGACAAGCG GCCGGACTGT
CCGCAGGTCG TGATCGCGCT GGTGGTGACC CCTGACGGCC TGCCGCTGGC TTACGAGGTA
TTGCCCGGCA ACACTGCCGA CAGCAGGACG TTGCGGATGT TCCTTTCCAA GATCGAGCAG
CAATACGGCA AGGCACGCCG GGTCTGGGTG ATGGATCGCG GCGTGCCGAC CGAGGCCGTG
CTGGCGGAGA TGCGGGGCAG CGATCCGCCG GTGCAATATC TGGTGGGAAC GCCAAAGGGC
CGCCTCAACC GTCTGGAGAA GCATCTCGTC GACAGGCCCT GGCAGGACGC GCGCGAGGGC
GTCAAGGTGA AGCTGCTGGC CGAGGACGGC GAGCTGTACG TGTTCGCGCA GAGCCATGAC
CGCGTGACCA AGGAGCGCGC CATGCGCCAG CGGCAGTTGA AGTGGCTGTG GAAGCGGCTG
CGGCAGATCG CCGTCATGGA GCTGACGCGC GAGGAGCTCC TGATGAAGCT CGGCGCCGCG
CGCTCACATG CGCCGGCGGC CTGGCGGCTG GTCGACATCG AGGTCGACAA GCAACACCCG
CGCTTCAGCT TCACGCTCAA TCGCAGCAAG CTGCGCAGGA CGCGCCGGCG CGAAGGCCGT
TATCTGCTGC GCACCAATCT TGCCGACAAT GATCCAGCGA AGCTCTGGCA ATATTACGTT
CAGCTCGTTG CCGTTGAAGA AGCCTTCCGT AATCTCAAGG GCGACCTGGC GATCCGCCCG
GTCTTCCACC AGGACGAGGC GCGGATCGAG GCCCACATCT TCATCGCCTT CCTGGCTTAC
TGCATGCAGG TCACGCTAAC CCGGCGTCTC CACGCCCTGG CGCCGGGGCT CACGGCACGC
AGCGTTCTCG ATAAATTTGC CGCCATGCAG ATGATCGATG TCCATCTGCC CACGACCGAC
GCACGCGAGA TCGTTCTCAC CCGCTACACC CATCCCGAGC CCGAACTGCA GCTTCTGATC
GACCGCCTCA AGCTCAGCCT GCCGCCACAA CCGCCGCCGA GGATGCGGAT TCCGACGAAG
TCGCCCAGGC GTACCGATAT GAAGTCGCCC GTGGATTCCG AGACGATGTC GCCCACCTTT
CCGATTTGA
 
Protein sequence
MIHKGLDVRI RPKSAVVKTY PIPKAMTVRV GFAIMFLRRT ERKKNGKTHT YWSVVENKRL 
DGGRVVQRHV LYLGEINSSQ AASWRKAIEV FDEDTGRAQT LSLFAEDRCE AVAGDASIIQ
LRLSQMRLHR PRQWGACWLA GQLWQELQLD QFWAERLPPS RKKTRWDQIL QVLATYRLIA
PGSEWRLHRQ WFGDSAMADL LGADFGLVEE HKLYACHDLL LAHKDALFSH LVGRWRDLFN
ADFDVLLYDL TSTYFDVNAA DLPEDGKRRH GYSRDKRPDC PQVVIALVVT PDGLPLAYEV
LPGNTADSRT LRMFLSKIEQ QYGKARRVWV MDRGVPTEAV LAEMRGSDPP VQYLVGTPKG
RLNRLEKHLV DRPWQDAREG VKVKLLAEDG ELYVFAQSHD RVTKERAMRQ RQLKWLWKRL
RQIAVMELTR EELLMKLGAA RSHAPAAWRL VDIEVDKQHP RFSFTLNRSK LRRTRRREGR
YLLRTNLADN DPAKLWQYYV QLVAVEEAFR NLKGDLAIRP VFHQDEARIE AHIFIAFLAY
CMQVTLTRRL HALAPGLTAR SVLDKFAAMQ MIDVHLPTTD AREIVLTRYT HPEPELQLLI
DRLKLSLPPQ PPPRMRIPTK SPRRTDMKSP VDSETMSPTF PI