| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1436 |
|---|
| Symbol | |
|---|
| ID | 5148982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 1521083 |
|---|
| End bp | 1521667 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640556410 |
|---|
| Product | ATP synthase A chain (ATPase protein 6) |
|---|
| Protein accession | YP_001237568 |
|---|
| Protein GI | 148252983 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
|---|
| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.595185 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCGC TGGCTCTAGT CTGCCGGTTC GTCACGCGCC GCCTGGCAAT CCTGCCCGAC
GGGCGGCAGG CGCTGCTTGA GGGCATCGTC ACCAGCGTTG CCGGCCAGAT CGAGGATGTC
ATTCGCAAGG ATGCGCGGCC GTTCCTGCCC TTGCTGGGCA CGTTAATAAT CTTTCTGGTG
GTCGCCAACC TCTCCGGTGT ACTCCCCGGC GTCGAGGCGC CAACCAGCAA GATCGAGACG
CCGGCGGCCC TGGCGCTGAT TGTCTTTTTC TCGGTGCATT ACTTCGGGGT GCGCGAACGC
GGTTTGCGCG GCTATCTCGC CAGCTTCGCC GAGCCTAAAC TGATCATGCT GCCCCTCAAT
ATTCTCTCGG AAATCACGCG CACCTTTTCG CTGATGGTGC GACTGTTCGG CAACATTATG
AGCGGCGAGT TCATCATCGG TCTCGTGGTG GCGCTCGCCG GCCTCTTTGT CCCGATCCCG
CTCATGGCGC TCGAGATTCT AGTGGGCCTC GTACAGGCCT ACATCTTCAC CGTACTCGCA
ACCGTCTTTA TCGGCGCCGC GGTCGGCAGC GTCGCGAAGG GCTAA
|
|---|
| Protein sequence | MAALALVCRF VTRRLAILPD GRQALLEGIV TSVAGQIEDV IRKDARPFLP LLGTLIIFLV
VANLSGVLPG VEAPTSKIET PAALALIVFF SVHYFGVRER GLRGYLASFA EPKLIMLPLN
ILSEITRTFS LMVRLFGNIM SGEFIIGLVV ALAGLFVPIP LMALEILVGL VQAYIFTVLA
TVFIGAAVGS VAKG
|
|---|
| |