| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1423 |
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| Symbol | |
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| ID | 5150528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1509330 |
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| End bp | 1510445 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640556400 |
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| Product | RND family mulitdrug efflux protein |
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| Protein accession | YP_001237558 |
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| Protein GI | 148252973 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.427177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.182381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCCC ACTCGTTCAA TCCGCCTCAA ACCGGTCGTG CGCCGAAGTT ATTCGTCGCG
GCCGTCGCGC TGGTCGCGGC CACGCTCAGC GGCTGCAATG ACCACAGCGC ATCGACAGTC
ACGCGCGCGG CGATCGTCCG GACCGCGCTC GTGCAGCCGC GCGACCGCCG GGCTGACATC
ACGCTGACCG GGGAGGTCCA GGCGCGCTTC CGAGCTGATT TGTCGTTCCG AATCAGCGGC
CGCGTGCTGG CGCGCTATGC CGATGTCGGC TCCCACGTCA GGGCCGGAGA GGTGCTGGCG
GTTCTTGATC CCGCCGAGCA ACAGGCCGAC GTCGATGCCG CGACCGCGGC GGTGACATCC
GCGGAAGCTC AGCTGCGGGT GGCGATGGCT ACCTTTGAGC GGCAGAGGTC GCTGATTGCA
AGCGGCTTCA CGACCCGCCC GGCCTACGAT CAGGCGCAGG AGGGCTTGCG CTTGGCGGAA
AGCACGCTGG AGGCCGCACG AGCGCAACTC GGCACCTCGA AGGAAGCGCT CGGCTACACG
GCCCTGCGCG CCGAAGCCGA CGGCGTCATC ACCGCACGCA ACCTGGAAGC AGGCCAGGTC
GTGCCGGCCG CGCAGCCCGT ATTTTCGCTG GCACGAGACG GAGAGCGGGA TGCGGTGTTC
GACGTCTACG AATCCGTCTT CCTTGGCCAG ACCGACAGTC GCGGCGTCGC GCTGTCGCTG
GTCTCCGACC CCGCGGTGAC GGCGCTGGGA CATGTCAGGG AAGTCTCGCC GGTCATTGAC
GCGAAGAGCT CAACGATCCG CGTCAAGGTA TCGATCGAGA ATCCATCGGC CGCGATGACG
CTCGGCAGCG CTGTCGCCGG AACGGTCAAG GCGACGGCGC AGACCGAGAT TGCGTTGCCG
TGGAGCGCAT TGATGGCGGC CGGTGAAAAG TCGGCGGTCT GGACCGTCGA TCCGGCCACG
CGCACGGCGT CGCTGAAACA GGTGACTGTT GGCGGCTACG AGGCGGGTGA AGTGTTGATC
AAAGCGGGGC TCGAGCCCGG CGAGCGCGTC GTGATCGATG GCGGCAAGCT TCTGAGCGTA
GGCCAGCTGG TGACTTATGA GGGAGACCGG TCATGA
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| Protein sequence | MTSHSFNPPQ TGRAPKLFVA AVALVAATLS GCNDHSASTV TRAAIVRTAL VQPRDRRADI
TLTGEVQARF RADLSFRISG RVLARYADVG SHVRAGEVLA VLDPAEQQAD VDAATAAVTS
AEAQLRVAMA TFERQRSLIA SGFTTRPAYD QAQEGLRLAE STLEAARAQL GTSKEALGYT
ALRAEADGVI TARNLEAGQV VPAAQPVFSL ARDGERDAVF DVYESVFLGQ TDSRGVALSL
VSDPAVTALG HVREVSPVID AKSSTIRVKV SIENPSAAMT LGSAVAGTVK ATAQTEIALP
WSALMAAGEK SAVWTVDPAT RTASLKQVTV GGYEAGEVLI KAGLEPGERV VIDGGKLLSV
GQLVTYEGDR S
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