Gene BBta_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1421 
Symbol 
ID5150612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1507601 
End bp1508173 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content60% 
IMG OID640556398 
ProductTetR family transcriptional regulator 
Protein accessionYP_001237556 
Protein GI148252971 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.216023 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTCCTGG AAAAGGGTTA CCGAAGCGCG AGCATCGACG ACATTTCCGA GATGGCTCCC 
GCAAGCAAAC CGACGATCTA TGCTCACTTC CCCGGGAAGG AGGCACTATT CGCGGCGGTG
GTTGCCCGTA CCATCAGCGG ACTCACGGAT TTCGAGGGCT TCACACCCGA GGGTCGCACG
ATCGAAGACA AGCTGATGAG CCTCGGGACA GTCATCATCG AGCGAGTCTT CGAAGAGTCG
CTGGGCATGG TGCGCGCCAC GATCGCCGAG GCGCCGCGCT TCCCCGAGTT GAGCCGCAAC
GTCCACGACG CTGCGCGGGA TCGCTCGTTG ACCGCCGTAT CCCAGCTCCT GAACGACGCG
ACACAGAAAC TCGCGCGGGC TCCGAAGGGC CCTTTCAGCG CAAAACGAAG CCGCACCACG
GCACAGATCT TTCTGGATCT TATTCTTCTC CCGATGCTGT TCCGGTCCCT TCTCGGGGAG
ACGCCGAAAG ATCTGAAGAA GGAGCTTTCT GTCTTCCTGC GCGAGCGCGT AGGCTTTTTT
CTCGCCGCGT GTGAGACGGA TTGGTCTCAC TAG
 
Protein sequence
MFLEKGYRSA SIDDISEMAP ASKPTIYAHF PGKEALFAAV VARTISGLTD FEGFTPEGRT 
IEDKLMSLGT VIIERVFEES LGMVRATIAE APRFPELSRN VHDAARDRSL TAVSQLLNDA
TQKLARAPKG PFSAKRSRTT AQIFLDLILL PMLFRSLLGE TPKDLKKELS VFLRERVGFF
LAACETDWSH