Gene BBta_1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1404 
Symbol 
ID5149670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1497478 
End bp1498593 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content55% 
IMG OID640556384 
Producthypothetical protein 
Protein accessionYP_001237542 
Protein GI148252957 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.201974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCTGG TTTTGACCAT GCATGCTCCC CCAGACCTGA CTGGAGAAGA TATGTTCATC 
AATCCTCACA ACCACAGCTC CCAGCTTGTC CGACAGGCGC TGAGTCTCGT TATGCCTCTC
GTCTTGGCCT TCGGCTTCAT CGTGGTGCTG GCGCCAGCGC CGGCGAATGC CTGTGCTTGC
GGCTGCAGTG TTTTTGACGT TGGCGGCGGC TTGCTGCCTC AGGAAGACGA CCATGGCGGC
AGGATATTCA CAGAATGGTG GCATTCTGAT CAGAACAAGA ACTGGATTGG CGGATCGAAG
GGGCCGGCAG GCGCCAATTC CGATAAGCAA GTTCGGACTG ACTGGTTCAC GGTCGGGCTT
CAATACATGT TCAATCGTGA CTGGGGCGTC ACTGTCCGCG TTCCCTACGT CAATCGGTCC
TTCACCACGG ATACCAACTT CCCGAACGAC CCAGCCACCC CGCAGACTTT CAAATCACGC
TCGTTCGGCG ATGTCGAAGT CATGGGAATG TACACCGGCT TCTCGAAAGA TCTATCGACC
GGGATCATCT TTGGATTGAA GCTGCCGACC GGGACGTTTA CCGCTACCGG GTTGGATCGC
GATACCCAGA TCGGCTCCGG GAGCACCGAC CTCATCCTCG GCGCCTTCCA TCGTGGAATG
ATCACGGGCG ACAACGCTTG GCAATATTTT TCTCAGATCA GGTGGCAGCA GCCATTTCTG
TATCAGTCAG CGTATAATCC AGATTCGGGG CTGAACGAGC TTTACAAGCC TGGCTACCAG
ATTGATGCTG CCGGCGGCAT CGTCTATAAC AATTTTTATA ATGTGCTTGG CTTTGATAAG
ATTGCCCCGC TGGTGCAACT CATCGCCTCC CATCGGCAAC GCGATAGCGG CCCAGCCTCC
GACCCGCTCA ATACCGGATT CGACCGCCTC ATGATCTCTC CCGGCATCGA GTTCACGAAG
GTTCTCGATG AAGAGCACAA GCGGGTCTTC AAGTTCTATG TCGATGTCGA GATTCCGATC
TATTATCGGA CCAACGCTGC GATCAACGAC AAGGGCAGCC AGGGGCAGCT CATTGCGCCC
TACATGTTCA AGACCGTGGC GAGCTACAAT TTCTAG
 
Protein sequence
MRLVLTMHAP PDLTGEDMFI NPHNHSSQLV RQALSLVMPL VLAFGFIVVL APAPANACAC 
GCSVFDVGGG LLPQEDDHGG RIFTEWWHSD QNKNWIGGSK GPAGANSDKQ VRTDWFTVGL
QYMFNRDWGV TVRVPYVNRS FTTDTNFPND PATPQTFKSR SFGDVEVMGM YTGFSKDLST
GIIFGLKLPT GTFTATGLDR DTQIGSGSTD LILGAFHRGM ITGDNAWQYF SQIRWQQPFL
YQSAYNPDSG LNELYKPGYQ IDAAGGIVYN NFYNVLGFDK IAPLVQLIAS HRQRDSGPAS
DPLNTGFDRL MISPGIEFTK VLDEEHKRVF KFYVDVEIPI YYRTNAAIND KGSQGQLIAP
YMFKTVASYN F