| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1390 |
|---|
| Symbol | |
|---|
| ID | 5149580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 1488748 |
|---|
| End bp | 1489632 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640556370 |
|---|
| Product | putative N-formylglutamate amidohydrolase |
|---|
| Protein accession | YP_001237529 |
|---|
| Protein GI | 148252944 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3741] N-formylglutamate amidohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000503098 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.218826 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAGT TTGATGGCGA ATTGCCGCCG TTCGAGATCA TGGAGCCTGC CACTTGGCGC
GCGCCCATCA TCTTCAATTC GCCCCATTCC GGTTCGGTCT ATCCCGACGA GTTCCTCAGG
GCGTCCCGAA TCGATCTTCC GACCCTGCGG CGGTCCGAAG ATTCGTTCAT GGACGAGCTG
ATCGCAGACC TCTTGGCGCG CGGCTTTCCG ACCGTCCGGG TGCATTTTCC GCGCTGCTAT
GTCGACGTCA ACCGCGAGCC CTATGAGCTC GATCCGCGCA TGTTCACCGG CCGGCTGCCG
AGCTTCGCCA ACACCCGCTC CATGCGCGTG GCCGGCGGCC TCGGCACCAT CCCCCGGGTG
GTCGGCGACG GCCAGGAGAT CTATCGCGAT CGCCTCAACG TCGACGAGGC GCTGCACCGC
ATCGAGACGC TTTACAAACC GTATCACCGC GCTCTGCGCC GGCTGATCAA CCGGGTGCAC
CAGCAATTCG GCACCGTCAT CCTGGTCGAT TGTCACTCGA TGCCCTCGGT CGGCGTGTCG
CGCGACGAGC CGCGGCGGCC GGACATGGTG ATCGGCGATC GCTACGGCAC GAGCTGCGCG
GCGCTGCTGC CGAACCTGTT CGAGGATGTG CTCGGCCGCC TCGGCTATTC GGTGGGCCGC
AACAAGCCCT ACGCCGGCGG CTTCATTACC GAGCATTATG GAAATCCGGC GAGCGGCCTG
CACGCGATCC AGATCGAACT CAACCGCGCG ATCTACATGG ACGAGCGACG GCGTGAGCGC
GGACCCCGTT TCGCGCAGGT CGCGTCGGAT CTCACCGTTC TCGCCGAGGT GCTCGCGACC
GTGCCGCTCG ACGATCTCGG CCCGTTCCAG GCTGCGGCCG AATAA
|
|---|
| Protein sequence | MTEFDGELPP FEIMEPATWR APIIFNSPHS GSVYPDEFLR ASRIDLPTLR RSEDSFMDEL
IADLLARGFP TVRVHFPRCY VDVNREPYEL DPRMFTGRLP SFANTRSMRV AGGLGTIPRV
VGDGQEIYRD RLNVDEALHR IETLYKPYHR ALRRLINRVH QQFGTVILVD CHSMPSVGVS
RDEPRRPDMV IGDRYGTSCA ALLPNLFEDV LGRLGYSVGR NKPYAGGFIT EHYGNPASGL
HAIQIELNRA IYMDERRRER GPRFAQVASD LTVLAEVLAT VPLDDLGPFQ AAAE
|
|---|
| |