Gene BBta_1382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1382 
Symbol 
ID5149209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1476148 
End bp1478955 
Gene Length2808 bp 
Protein Length935 aa 
Translation table11 
GC content66% 
IMG OID640556362 
Producthypothetical protein 
Protein accessionYP_001237521 
Protein GI148252936 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.686008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.478285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAG ATCGCGCCCG CGTCCGTGAC GCCCTGCCGG GACAGATTCC GGTGTCGCCC 
GACAATCCCT GTCCTTTTCT CCGGGCCCTC GTGGCTGGCG GCTTTGTGGA TGGCCACACC
GTGCCGCTCA AGACGATCTC CGCCCGGATC GAGGCGGCGA GCGGCGAGAC GGGATTCAAG
AAGCGTATCG TCGGGATCGA GACGTTCGGA GTCGCGCTGA TCGCCAATGG TCTGTCGCCG
CTGCGCCTGC TGAAAAGCCT GTTCTCCGGC GCCGATCTCG ACGAGTTGCG CAACGGGCCA
CTCGACAAGC ATGGCGGCGG CTCGCGCATC CTCGATGCAA AGGCAGATGT TCACCCCGCG
GAGATCGACC GGTTTGCGAG TTTCGGCAGC GACTATCCCG ATCCCAATGG CGGCACCGAG
CGCGGCCTGA ACGCGGCGCA GATCCAGACC TTCATGAAGG CCAATCTGAA GCGCGACGGC
GACAAAGCGC GCTGGTACTA TCCCCTGTTG ATGCAGGGCG AATGGCCGGT GCTGCTGCGC
GTGATCGGCA AGGGCGACGG CGACAACCGC TATCTGTCGG TTGCCGAGGT CCGCACCCTG
TTCGTCGAGC GTCGCCTTCC GCAGCGCATC GTGGCACGTC TGACCGCTAA GCCGCAGCCC
GCCAACATCA TCATGCGGAT CGGCAAGGCA CTGCTCGGCG GAGCCATCGC CGCAGCCGTC
GTGCTGTTCC TGGCGTGGGT CGCCGCTCCC GACGCGGTCA GCGACAGGCT GAGCGCGGTG
CTGCCGGCGA AGGCTGCCGC CCTGATCCCA CCGGCCCTGC CCCAGACCCA GCCGACCCAG
GCGGCCTACT GGCTCGACCA GGGCTGGACC ACCAAGGACC GGCATTGGTT CCATCACGTG
ACCCAGGGCA CCGCGACCTT CCCGATCCCC TACAATTGGT TCATGGCGAT GGAGCAGCCT
TATCTGTCGC TGTTCGGTAC GCCTGGCCTG ATCTCCGATA CCGCCTATCT CGAACGCTTC
GGCTTCATCC CGAGCCCGAA AAGCGTCGAC GGCGAGCCCA GCGCGCTGCA GCCGTTCGGC
TACGGCCCCA ACGCGACCGC CAAGACCGAC ATCGCCCCCG CGCTTCCGGC CGGGCTGAAG
CCGACCCCAG CCGGCAATGA AGGCGGTTTG CCGGTCGGCT TTGCGCGGCT CAGCGGCGTC
ACCAATCCGG CGAACGGCGC GCCCGAGCCC GACAAGATCG GCCTGACCTG CGCGGCCTGT
CACACCGGCA GCATCCACTA CAAGGGCGTG AGCGTCCGCT TCGACGGCGG CCCCGGCATG
GTCGACCTGC GCAAGCTCGA AGAGGCGATG GGCTTTGCGA TGCTCTTCAC GCAATATGTG
CCCGGTCGCT TCTCGCGCTT CGCCGACCGG GTGCTCGGGC CCAACGCGAC CGACGCCGAA
CGCGAGACCT TGAAGAAGGG GCTGAAGGCT GCCACCGACT TCGCCCTCAC GATGCAGGCC
AAGAACTACC AGACTGCCAT CGCGGCCAAG GGACAGACCG AGACCATGGA GGGCTTCGGC
CGGCTCGATG CACTGAACCG CATCGGCAAC CAGGTCTTCT ATCTCGACAT GGCGATCAGC
GGACTGCCGA ACATGCTCGG CAATCAAGAG GCCATTGACG CGCCGGTCTC CTATCCGCCG
ATCTGGACCG TGCCCTGGTT TTCCTGGGCT CAGTATGACG GCTCGATCGC GCAGCCTTTG
ATCCGCAATG CCGGCGAGGC GCTGGGCGTG TCTGCGGAAA TCAACTTTTC GCCCGAGCCG
GCGAGCAACC GACTCTGGCG CTCGTCGATG GCGGTCGAAA ACCTGCTGCA CATCGAGGAC
ATGCTGCGCG GCCCCGACCC GTTCGCCACC ACGACGCCTG CATTCGGCGG TCTGACGTCG
CCGAAATGGC CGGAGAAGCT GTTCCCCGAC GACGAGGCCT GGAAGATCAA GACAGCGCGC
GTCGAGAACG GCCGCAAGCT CTATGCGACG ATCTGCGTCG AGTGCCATCT CGGTCCGGTG
GCCGACCCCG TCTTCGACAA GACCTATCCG GACAAGAGCT TCTGGAAGAT CAAGCCGCGG
GACGATTGGG AGAGCAAGGG CTGGAACGCG AAGGGACCGA TCCTCGACCT GGTCCAGAAG
CCGGTCGAGG TGATGCAGAC CGATCCCGGC CAGGCCAGTA TCCTCGCCAA TCGCAAGGTC
AAGGTGCCCG GCTTCCTCGA CGTCGACCCG GCCAAGGACC TGAAGGGCTG CGGCCTGCCC
CAGGGCTCGA CCACCGAGAT GTCCTATGCG CTGGCGCTGA TGGCTGTCGT GCAGAAGGCG
AGCGACAAAT GGATGGAGGA CCGCAAGCTC TCCGCGGCCG AGCAGGCGGC GCTGTGGGGC
GATCGCAAGA ACTGCCCCAA TCCGGCTGGC AACACCTATC GGGCCCGGCC GCTCAACGGC
GTCTGGGCGA CCGCGCCCTA TCTGCATAAC GGCTCGGTGC CGTCGCTGTA CTGGCTGTTG
ACGCCGGCCG CCGAGCGACC GACCTCGTTC TGCCAGGGCG CCCGGGACTA CGACCCGAAA
CAGGTCGGCT TCGCGGTCCC GGCGGGCGGC GAGACGTCGT GCAAGGTTGG CCAGACGCTG
TTCGCAACCA AAGACGCCAG CGGCAAGCCG ATCAAGGGCA ACAGCACCCT CGGTCATTCC
TTCGAGGGTC CCGCGCGGCC CAACAAGGAC TATCCCAACG GCATCATCGG CGGCGCCTTC
TCCGAGGAGG AGCGCTGGGA CCTCATCGAG TATCTCAAGA CGCTCTGA
 
Protein sequence
MQKDRARVRD ALPGQIPVSP DNPCPFLRAL VAGGFVDGHT VPLKTISARI EAASGETGFK 
KRIVGIETFG VALIANGLSP LRLLKSLFSG ADLDELRNGP LDKHGGGSRI LDAKADVHPA
EIDRFASFGS DYPDPNGGTE RGLNAAQIQT FMKANLKRDG DKARWYYPLL MQGEWPVLLR
VIGKGDGDNR YLSVAEVRTL FVERRLPQRI VARLTAKPQP ANIIMRIGKA LLGGAIAAAV
VLFLAWVAAP DAVSDRLSAV LPAKAAALIP PALPQTQPTQ AAYWLDQGWT TKDRHWFHHV
TQGTATFPIP YNWFMAMEQP YLSLFGTPGL ISDTAYLERF GFIPSPKSVD GEPSALQPFG
YGPNATAKTD IAPALPAGLK PTPAGNEGGL PVGFARLSGV TNPANGAPEP DKIGLTCAAC
HTGSIHYKGV SVRFDGGPGM VDLRKLEEAM GFAMLFTQYV PGRFSRFADR VLGPNATDAE
RETLKKGLKA ATDFALTMQA KNYQTAIAAK GQTETMEGFG RLDALNRIGN QVFYLDMAIS
GLPNMLGNQE AIDAPVSYPP IWTVPWFSWA QYDGSIAQPL IRNAGEALGV SAEINFSPEP
ASNRLWRSSM AVENLLHIED MLRGPDPFAT TTPAFGGLTS PKWPEKLFPD DEAWKIKTAR
VENGRKLYAT ICVECHLGPV ADPVFDKTYP DKSFWKIKPR DDWESKGWNA KGPILDLVQK
PVEVMQTDPG QASILANRKV KVPGFLDVDP AKDLKGCGLP QGSTTEMSYA LALMAVVQKA
SDKWMEDRKL SAAEQAALWG DRKNCPNPAG NTYRARPLNG VWATAPYLHN GSVPSLYWLL
TPAAERPTSF CQGARDYDPK QVGFAVPAGG ETSCKVGQTL FATKDASGKP IKGNSTLGHS
FEGPARPNKD YPNGIIGGAF SEEERWDLIE YLKTL