| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1367 |
|---|
| Symbol | |
|---|
| ID | 5156220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 1452573 |
|---|
| End bp | 1453679 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640556347 |
|---|
| Product | aliphatic sulfonate ABC transporter periplasmic solute-binding protein |
|---|
| Protein accession | YP_001237506 |
|---|
| Protein GI | 148252921 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0520696 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAACC GAGTATCGCC GCTGATGAAC ATCATCGATC TGAGCCGCGG GCGCAAAGAC
GCCCTGCTGT TGAGGCTTGC GCTGTTGAGA CTTGCGCAGA GCCTTGCTGC TTTCGTGCTG
TTGCTGGCAA CGGCTTTCGT TGCCTCCGAG CCGGTTCGCG CCGAGGAGAG CTCCAAATCG
CAGTGGCCTG CTCCAGAAAA GCTGGAGCTG CGCTACCAGG GCTGGTCGGG CAGGGTGCTC
TATCCGGAGC TCGCCGAGGA CCTCGGCTAC CTTGCCCCCG TCAAGCTGAA ATGGATCGGC
AACACGATTT CGGGTCCGCA GGACATCCAG GCGGCGGTGA CCGGCGATAT CGATTTCGGC
GGTGCCTTCA ATGGCTCGAT CCTGAAGCTC GCTGCAGCGC ATGCCCCGAT TAAGGCGGTG
ATCGCCTATA TCGGCACCGA TGCCCAGACC AGCGGCGGCC TTCTCACCCT CAATTCGAGC
CCGATCCAGA ACGCCACGGA CCTCGTCGGC CGCAAGATCG GCGTCAACAC GCCGGGCGCC
TATCAGGAAT ATCTCATCAC CGTTTATCTG CAGAAGTCGG GCGTATCGGC CGAGGACATC
AAGAAGGTGA TCTTCGTGCC GGCGCCGCCG GTCAACCTCG CGCAGCTGCT GCGGGCCAAG
CAGCTCGACG CCATCTTTCT CGAAGACATC CTGAAGGAGA AGGTGCTCGC AGAGGGTGAT
GCGCGCCTCC TGGTCACCGA CTACGGCCTG CTCGGCTCGT TCGGCTATGC AGCCTACATC
CTCACCGATC GGTTCATCGC GCAATATCCG GGGACGTCGC GGAAGTTCGT CGAAGCCACC
GCGCGCGCGA TTGCCTGGGC ACAGTCGACG CCGCGCGAGG AGGTGATCGC GCGGCTGGAG
AAGATCCTGC AGGAGCGCAA CAGGAACGAG GACAGGACGG CGGTGCGCTA TTGGAAATCC
GCCAGCGTCG GCGGCAAGGG CGGCGTCATC CGCCCCGAGG AGTTCGAGAG CTACCAGGCG
TGGTTCGAGG CCAATGGTCA GCTGAAGCCG GGCCAGATCC GCGCGGCCGA CGTCTATACC
AACCGGTTCA ATCCGTTCGC GGACTGA
|
|---|
| Protein sequence | MLNRVSPLMN IIDLSRGRKD ALLLRLALLR LAQSLAAFVL LLATAFVASE PVRAEESSKS
QWPAPEKLEL RYQGWSGRVL YPELAEDLGY LAPVKLKWIG NTISGPQDIQ AAVTGDIDFG
GAFNGSILKL AAAHAPIKAV IAYIGTDAQT SGGLLTLNSS PIQNATDLVG RKIGVNTPGA
YQEYLITVYL QKSGVSAEDI KKVIFVPAPP VNLAQLLRAK QLDAIFLEDI LKEKVLAEGD
ARLLVTDYGL LGSFGYAAYI LTDRFIAQYP GTSRKFVEAT ARAIAWAQST PREEVIARLE
KILQERNRNE DRTAVRYWKS ASVGGKGGVI RPEEFESYQA WFEANGQLKP GQIRAADVYT
NRFNPFAD
|
|---|
| |